RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 SFT2D3Q587I9 215 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 PLEKHG4Q58EX7 1191 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 CDC73Q6P1J9 531 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 SPATA31D4Q6ZUB0 917 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 TBC1D21Q8IYX1 336 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 TWIST2Q8WVJ9 160 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 TMEM203Q969S6 136 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 RAD51AP1Q96B01 352 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ARMC5Q96C12 935 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 FRMD6Q96NE9 622 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 VAT1Q99536 393 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 PDCD10Q9BUL8 212 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 BCL2L14Q9BZR8 327 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 NMUR1Q9HB89 426 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 CLN6Q9NWW5 311 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
RTN3-202ENST00000339997 POLR1DQ9Y2S0 133 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 PCDHGC4Q9Y5F7 938 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ST14Q9Y5Y6 855 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 LMO7Q8WWI1 1683 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 LAMA2P24043 3122 aaKnown RBP8.66□□□□□ -1.02
RTN3-202ENST00000339997 NFASCO94856 1347 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 SGTAO43765 313 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 FESP07332 822 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 IGFBP5P24593 272 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 MON1BQ7L1V2 547 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 OOSP2Q86WS3 158 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 XYLT1Q86Y38 959 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ZDHHC17Q8IUH5 632 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ZNF366Q8N895 744 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 MAGEC3Q8TD91 643 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 NODALQ96S42 347 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 EBPLQ9BY08 206 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 BCKDKO14874 412 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 OR56A5P0C7T3 313 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 THRBP10828 461 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ATF4P18848 351 aaPredicted RBP8.66□□□□□ -1.02
RTN3-202ENST00000339997 HDCP19113 662 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 MC4RP32245 332 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.66□□□□□ -1.02
RTN3-202ENST00000339997 RAPSNQ13702 412 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
RTN3-202ENST00000339997 NDUFAF6Q330K2 333 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 HECTD2Q5U5R9 776 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 MZT2BQ6NZ67 158 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 FAM9CQ8IZT9 166 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 ZNF567Q8N184 647 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 AGBL3Q8NEM8 1001 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 KBTBD8Q8NFY9 601 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 OR4L1Q8NH43 312 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 XAGE5Q8WWM1 108 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 C7orf26Q96N11 449 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 PANX3Q96QZ0 392 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 GPR21Q99679 349 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 SP140LQ9H930 580 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 RAPGEFL1Q9UHV5 662 aa8.66□□□□□ -1.02
RTN3-202ENST00000339997 PIP5K1BO14986 540 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 OR4F21O95013 312 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PRKACGP22612 351 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ADRA1BP35368 520 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ENTPD1P49961 510 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 CLCN5P51795 746 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 NUDT6P53370 316 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ITGA1P56199 1179 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 DSC2Q02487 901 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 CDK18Q07002 472 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 COLEC12Q5KU26 742 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ATAD3BQ5T9A4 648 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 OLFML2AQ68BL7 652 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 REP15Q6BDI9 236 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 POMZP3Q6PJE2 187 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 TAF8Q7Z7C8 310 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 FAM35AQ86V20 835 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PARGQ86W56 976 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 POMGNT2Q8NAT1 580 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 HEXDCQ8WVB3 486 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 SPACA7Q96KW9 195 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 CCDC3Q9BQI4 270 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 POLE4Q9NR33 117 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PCDHGA3Q9Y5H0 932 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PPP2R3BQ9Y5P8 575 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 LRRC14BA6NHZ5 514 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 H7C0S8 307 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 SUV39H1O43463 412 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 IL1R2P27930 398 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ECT2LQ008S8 904 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PUDPQ08623 228 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 TEX44Q53QW1 395 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 LRRC73Q5JTD7 316 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ERICH5Q6P6B1 374 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 R3HCC1LQ7Z5L2 792 aaKnown RBP8.65□□□□□ -1.02
RTN3-202ENST00000339997 PGAM4Q8N0Y7 254 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 ATAD1Q8NBU5 361 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 PCDH19Q8TAB3 1148 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 TRNT1Q96Q11 434 aaKnown RBP8.65□□□□□ -1.02
RTN3-202ENST00000339997 SIX2Q9NPC8 291 aa8.65□□□□□ -1.02
RTN3-202ENST00000339997 NDOR1Q9UHB4 597 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms