RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TRMOQ9BU70 441 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 AGPAT4Q9NRZ5 378 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 GMIPQ9P107 970 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 ABCD2Q9UBJ2 740 aa12.27□□□□□ -0.45
VPS33B-201ENST00000333371 CDC7O00311 574 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 FMO4P31512 558 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ADARP55265 1226 aaKnown RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 PTPRRQ15256 657 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 CYP51A1Q16850 503 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 FBXL22Q6P050 247 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 UMODL1-AS1Q8N2C9 162 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 SNRNP27Q8WVK2 155 aaKnown RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 HBEGFQ99075 208 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 SEPHS2Q99611 448 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 EVLQ9UI08 416 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ASB1Q9Y576 335 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ANKRD36A6QL64 1941 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 CASP8AP2Q9UKL3 1982 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 CYP11A1P05108 521 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 GSK3BP49841 420 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ENTPD1P49961 510 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 TBX4P57082 545 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 UFM1P61960 85 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 PLIN5Q00G26 463 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 MERTKQ12866 999 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 TUSC3Q13454 348 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 DCTN2Q13561 401 aaKnown RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 PLCL1Q15111 1095 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 ADRM1Q16186 407 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 AAK1Q2M2I8 961 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 KANK2Q63ZY3 851 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 THEM5Q8N1Q8 247 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 EXOC2Q96KP1 924 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 NSMCE3Q96MG7 304 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 SLC30A3Q99726 388 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 NAA50Q9GZZ1 169 aaKnown RBP12.26□□□□□ -0.45
VPS33B-201ENST00000333371 TIMMDC1Q9NPL8 285 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 SLC52A3Q9NQ40 469 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 SLC8A2Q9UPR5 921 aa12.26□□□□□ -0.45
VPS33B-201ENST00000333371 M0QZQ0 153 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ACOX3O15254 700 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 PSMA4P25789 261 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ATP4BP51164 291 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ATP6V0D1P61421 351 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 NKX3-2P78367 333 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 CLCQ05315 142 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 NFYCQ13952 458 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 SETMARQ53H47 684 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 KLHL35Q6PF15 583 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 RNF180Q86T96 592 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ERI1Q8IV48 349 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 C12orf43Q96C57 262 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ISOC1Q96CN7 298 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 SLC39A13Q96H72 371 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 SERPINB11Q96P15 392 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 INTS7Q9NVH2 962 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ZNF225Q9UK10 706 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 MED16Q9Y2X0 877 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 LBPP18428 481 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 FASP25445 335 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 VARSP26640 1264 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 CCT8P50990 548 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 CLCN2P51788 898 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 NFKB2Q00653 900 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 YWHAHQ04917 246 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 DSC3Q14574 896 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ANKDD1AQ495B1 522 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 TBPL2Q6SJ96 375 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 CAMK1DQ8IU85 385 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 SCML4Q8N228 414 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 MAGEE2Q8TD90 523 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 ZUFSPQ96AP4 578 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 TMEM125Q96AQ2 219 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 RPRD1AQ96P16 312 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 CDK15Q96Q40 435 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 SDR39U1Q9NRG7 319 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
VPS33B-201ENST00000333371 PCDHA9Q9Y5H5 950 aa12.25□□□□□ -0.45
VPS33B-201ENST00000333371 LOC285095A0A1B0GVY8 99 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 NPEPPSL1A6NEC2 478 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 B4GAT1O43505 415 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 CRCPO75575 148 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 ATE1O95260 518 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 SNAP29O95721 258 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 RHOQP17081 205 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 IL10P22301 178 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 ZFP36L2P47974 494 aaKnown RBP12.24□□□□□ -0.45
VPS33B-201ENST00000333371 TNK2Q07912 1038 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 PMS2P3Q13401 168 aa12.24□□□□□ -0.45
VPS33B-201ENST00000333371 INPP5AQ14642 412 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms