RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 BPGMP07738 259 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CYP2A6P11509 494 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 NEFHP12036 1026 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 GABRG2P18507 467 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 SLC1A2P43004 574 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CTBP1Q13363 440 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CCDC153Q494R4 210 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 N4BP2L1Q5TBK1 243 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 ZNF470Q6ECI4 717 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CMC1Q7Z7K0 106 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 DENND6AQ8IWF6 608 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 STYXQ8WUJ0 223 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 EDAQ92838 391 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CHRDQ9H2X0 955 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 NLE1Q9NVX2 485 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 IL17CQ9P0M4 197 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 ANKRD6Q9Y2G4 727 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 A0A096LPK6 155 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 STX7O15400 261 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 ATG13O75143 517 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 RNASEH2AO75792 299 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 DCNP07585 359 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 C1SP09871 688 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 C7P10643 843 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 HMGCLP35914 325 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CD151P48509 253 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 DGKEP52429 567 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 PPM1JQ5JR12 505 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 ATG16L1Q676U5 607 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 OTOAQ7RTW8 1153 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 NUDCD3Q8IVD9 361 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 HMGB4Q8WW32 186 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 SUDS3Q9H7L9 328 aaPredicted RBP18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 FBXL12Q9NXK8 326 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 EMCNQ9ULC0 261 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 SIT1Q9Y3P8 196 aa18.67■□□□□ 0.58
EXOSC3-201ENST00000327304 SCN8AQ9UQD0 1980 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 GOLGA8CPA6NN73 597 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 DCXO43602 365 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 C2P06681 752 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 BGNP21810 368 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 NFKBIAP25963 317 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 LEPRP48357 1165 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 SUOXP51687 545 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 TAS2R38P59533 333 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 PRAMEP78395 509 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 MPP1Q00013 466 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 PTSQ03393 145 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 CCDC63Q8NA47 563 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 GANCQ8TET4 914 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 HDAC10Q969S8 669 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 TBATAQ96M53 351 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 OMDQ99983 421 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 WRAP53Q9BUR4 548 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 TSSK1BQ9BXA7 367 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 POLMQ9NP87 494 aaPredicted RBP18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 KLHL14Q9P2G3 628 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 SLC39A10Q9ULF5 831 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 FADS3Q9Y5Q0 445 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 BPTFQ12830 3046 aa18.66■□□□□ 0.58
EXOSC3-201ENST00000327304 CCT8L1PA6NM43 557 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 RPP40O75818 363 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TGDSO95455 350 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 PROCP04070 461 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 COL6A2P12110 1019 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 PSMA3P25788 255 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 STC1P52823 247 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ZBTB16Q05516 673 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ELP6Q0PNE2 266 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ARHGEF7Q14155 803 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 USP10Q14694 798 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CWF19L1Q69YN2 538 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 RFLNAQ6ZTI6 216 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 HSD11B1LQ7Z5J1 315 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ZNF398Q8TD17 642 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 RAB7BQ96AH8 199 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 HHIPQ96QV1 700 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 KDM4CQ9H3R0 1056 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CAB39LQ9H9S4 337 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 FKBPLQ9UIM3 349 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 FNDC3AQ9Y2H6 1198 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 PKP3Q9Y446 797 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TECTAO75443 2155 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 OR51F1A6NGY5 319 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TOP3BO95985 862 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ZNF30P17039 623 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 ABCG1P45844 678 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 RPS9P46781 194 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TTC31Q49AM3 519 aaPredicted RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 TAF1BQ53T94 588 aaPredicted RBP18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 C16orf46Q6P387 395 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 LIPIQ6XZB0 460 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CCDC121Q6ZUS5 278 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 CILP2Q8IUL8 1156 aa18.65■□□□□ 0.58
EXOSC3-201ENST00000327304 OTUD6BQ8N6M0 293 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms