RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PRSS44E7EML9 344 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 SYNCRIPO60506 623 aaKnown RBP10.27□□□□□ -0.76
SF3B2-201ENST00000322535 BCAS2O75934 225 aaPredicted RBP10.27□□□□□ -0.76
SF3B2-201ENST00000322535 APEHP13798 732 aaKnown RBP10.27□□□□□ -0.76
SF3B2-201ENST00000322535 DDCP20711 480 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 AKAP5P24588 427 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 MTHFRP42898 656 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 SNX16P57768 344 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 PIGFQ07326 219 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 PLD1Q13393 1074 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 CCINQ13939 588 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 ARHGAP36Q6ZRI8 547 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 TMEM126BQ8IUX1 230 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 C10orf107Q8IVU9 208 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 TRAF4Q9BUZ4 470 aaPredicted RBP10.27□□□□□ -0.76
SF3B2-201ENST00000322535 GON7Q9BXV9 100 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 WDR12Q9GZL7 423 aaKnown RBP10.27□□□□□ -0.76
SF3B2-201ENST00000322535 LHPPQ9H008 270 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 SLC6A17Q9H1V8 727 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 TINAGQ9UJW2 476 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 EDARQ9UNE0 448 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 PCDHGA2Q9Y5H1 932 aa10.27□□□□□ -0.76
SF3B2-201ENST00000322535 C16orf96A6NNT2 1141 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 NUPL2O15504 423 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 PTP4A3O75365 173 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 RFPL1O75677 317 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 VAPBO95292 243 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 CFHP08603 1231 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ZNF250P15622 560 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 TFE3P19532 575 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 AQP6Q13520 282 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 N4BP2L1Q5TBK1 243 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ACAD10Q6JQN1 1059 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ZNF438Q7Z4V0 828 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 TSPYL5Q86VY4 417 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 C7orf31Q8N865 590 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 FBXL13Q8NEE6 735 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 OR6F1Q8NGZ6 308 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 MFSD14AQ96MC6 490 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 TSEN34Q9BSV6 310 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 CDT1Q9H211 546 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 SLA2Q9H6Q3 261 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ZDHHC4Q9NPG8 344 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 AKIP1Q9NQ31 210 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 PRPF19Q9UMS4 504 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ANKRD6Q9Y2G4 727 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 KIAA0100Q14667 2235 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 TBX1O43435 398 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 BMP4P12644 408 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ITGA2P17301 1181 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ELK4P28324 431 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ARRB2P32121 409 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 MGAT3Q09327 533 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ZNF267Q14586 743 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ZNF484Q5JVG2 852 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 FAXCQ5TGI0 409 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 HMBOX1Q6NT76 420 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 SLC16A12Q6ZSM3 486 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 ADCK1Q86TW2 530 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 CLYBLQ8N0X4 340 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 MAPK15Q8TD08 544 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 DLG3Q92796 817 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 APOBEC3GQ9HC16 384 aaKnown RBP10.27□□□□□ -0.77
SF3B2-201ENST00000322535 SLC39A1Q9NY26 324 aa10.27□□□□□ -0.77
SF3B2-201ENST00000322535 CENPXA8MT69 81 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 FAM189A1O60320 539 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 BCAS1O75363 584 aaPredicted RBP10.26□□□□□ -0.77
SF3B2-201ENST00000322535 IL18RAPO95256 599 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 SNAP29O95721 258 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 NFICP08651 508 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 HOXC6P09630 235 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 PSKH1P11801 424 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 DNAJB1P25685 340 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 RPL22P35268 128 aaKnown RBP10.26□□□□□ -0.77
SF3B2-201ENST00000322535 RAP1GAPP47736 663 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 PSEN2P49810 448 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 SCNN1GP51170 649 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 VBP1P61758 197 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
SF3B2-201ENST00000322535 C1QBPQ07021 282 aaKnown RBP10.26□□□□□ -0.77
SF3B2-201ENST00000322535 MERTKQ12866 999 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 HERC3Q15034 1050 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 NFIL3Q16649 462 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 YIF1BQ5BJH7 314 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 LRRC8EQ6NSJ5 796 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 TMEM65Q6PI78 240 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 CEP68Q76N32 757 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 ARCQ7LC44 396 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 C12orf56Q8IXR9 622 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 ADGRF2Q8IZF7 708 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 TAGAPQ8N103 731 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 FAM149B1Q96BN6 582 aa10.26□□□□□ -0.77
SF3B2-201ENST00000322535 TESCQ96BS2 214 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms