RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CRISPLD1Q9H336 500 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TAS2R7Q9NYW3 318 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NCKAP1Q9Y2A7 1128 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 DHRS7Q9Y394 339 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KPNA3O00505 521 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PGRMC2O15173 223 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CSDE1O75534 798 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PRAMEF1O95521 474 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 STAU1O95793 577 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 LINC00032P0C843 101 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ADAM15Q13444 863 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SLC9A5Q14940 896 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TBRG1Q3YBR2 411 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 AKIRIN2Q53H80 203 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF767PQ75MW2 155 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM17Q86X19 198 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 B3GALNT2Q8NCR0 500 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 OR2T12Q8NG77 320 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ANKRD49Q8WVL7 239 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SH3KBP1Q96B97 665 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RDH12Q96NR8 316 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 OR52E6Q96RD3 313 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PKP2Q99959 881 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 MAB21L2Q9Y586 359 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 EI24O14681 340 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KPNA5O15131 536 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ICMTO60725 284 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RP2O75695 350 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 IPO13O94829 963 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KDM4BO94953 1096 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TOP3BO95985 862 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CYP11A1P05108 521 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ICAM1P05362 532 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PITPNAQ00169 270 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GRM2Q14416 872 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 HIST2H2ACQ16777 129 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PCID2Q5JVF3 399 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 OGFRL1Q5TC84 451 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GARNL3Q5VVW2 1013 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 HIST2H2AA3Q6FI13 130 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PRR5LQ6MZQ0 368 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 EPGNQ6UW88 154 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RNF146Q9NTX7 359 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TSPAN16Q9UKR8 245 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NPHS1O60500 1241 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GCATO75600 419 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 C8BP07358 591 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PTSQ03393 145 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF404Q494X3 552 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 IER5Q5VY09 327 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 UGT2A3Q6UWM9 527 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ADGRA1Q86SQ6 560 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CLYBLQ8N0X4 340 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 VANGL1Q8TAA9 524 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 GPRC5CQ9NQ84 441 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 HOXC10Q9NYD6 342 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM94Q12767 1356 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ANKRD63C9JTQ0 380 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 FAM86B1E9PN63 330 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 AZIN1O14977 448 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 CPB1P15086 417 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 RENBPP51606 427 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 ALDH3A2P51648 485 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 TAS2R40P59535 323 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 IL2P60568 153 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PRKCQQ04759 706 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 PABPC1LQ4VXU2 614 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 USP39Q53GS9 565 aaKnown RBP7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SULT1C3Q6IMI6 304 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SLC30A10Q6XR72 485 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 FBXO33Q7Z6M2 555 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 HAS1Q92839 578 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 SERAC1Q96JX3 654 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 VPS35Q96QK1 796 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 UCKL1Q9NWZ5 548 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 NYAP2Q9P242 653 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 KIAA1549Q9HCM3 1950 aa7.03□□□□□ -1.28
SMC1A-201ENST00000322213 UBXN8O00124 270 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 AP2A2O94973 939 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 ITGALP20701 1170 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 PROZP22891 400 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 UGT2B15P54855 530 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LIPEQ05469 1076 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 FAM136AQ96C01 138 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 C8orf37Q96NL8 207 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 COPS4Q9BT78 406 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CENPOQ9BU64 300 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 LRRC3Q9BY71 257 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 EIF3KQ9UBQ5 218 aaKnown RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CRYL1Q9Y2S2 319 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 CICQ96RK0 1608 aaPredicted RBP7.02□□□□□ -1.29
SMC1A-201ENST00000322213 A0A0X1KG70 313 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 BTN3A1O00481 513 aa7.02□□□□□ -1.29
SMC1A-201ENST00000322213 SLC6A2P23975 617 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms