RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GSTA2P09210 222 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 MAGEA3P43357 314 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 CSRP3P50461 194 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
SMCO4-201ENST00000298966 SLC10A7Q0GE19 358 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 FAXCQ5TGI0 409 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 DENND2CQ68D51 928 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 KCTD11Q693B1 232 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 NEK5Q6P3R8 708 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 CCDC81Q6ZN84 652 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 OR13H1Q8NG92 308 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 ALG14Q96F25 216 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 IFT43Q96FT9 208 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 NAT9Q9BTE0 207 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 CEP41Q9BYV8 373 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 CDC42EP4Q9H3Q1 356 aaKnown RBP21.03■□□□□ 0.96
SMCO4-201ENST00000298966 SAYSD1Q9NPB0 183 aa21.03■□□□□ 0.96
SMCO4-201ENST00000298966 TCRBV7S3A2A0A539 114 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 K7ESM1 405 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 SCAMP1O15126 338 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 ATP9BO43861 1147 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 HNRNPA2B1P22626 353 aaKnown RBP21.02■□□□□ 0.96
SMCO4-201ENST00000298966 TAS2R38P59533 333 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 CCDC15Q0P6D6 951 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 PDIA2Q13087 525 aaKnown RBP21.02■□□□□ 0.96
SMCO4-201ENST00000298966 DLG2Q15700 870 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 CCDC38Q502W7 563 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 HSP90B2PQ58FF3 399 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 OR52K2Q8NGK3 314 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 IMP4Q96G21 291 aaKnown RBP21.02■□□□□ 0.96
SMCO4-201ENST00000298966 SLC46A1Q96NT5 459 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 MGME1Q9BQP7 344 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 CINPQ9BW66 212 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-201ENST00000298966 FAM117AQ9C073 453 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 NFS1Q9Y697 457 aa21.02■□□□□ 0.96
SMCO4-201ENST00000298966 KIF26BQ2KJY2 2108 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 LY6G6EA0A0G2JKS1 128 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 BNIP3LO60238 219 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 ZMPSTE24O75844 475 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 PHBP35232 272 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 HNRNPKP61978 463 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMCO4-201ENST00000298966 SKOR1P84550 965 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 Q6ZVU0 165 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 HORMAD1Q86X24 394 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 CNPY4Q8N129 248 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 TAB3Q8N5C8 712 aaPredicted RBP21.01■□□□□ 0.95
SMCO4-201ENST00000298966 ATP11CQ8NB49 1132 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 PYROXD1Q8WU10 500 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 ATXN7L3BQ96GX2 97 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 PPCSQ9HAB8 311 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 NT5MQ9NPB1 228 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 FZD3Q9NPG1 666 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 DNAJC28Q9NX36 388 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 NINJ2Q9NZG7 142 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 PCDHGA8Q9Y5G5 932 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 U3KQA8 63 aa21.01■□□□□ 0.95
SMCO4-201ENST00000298966 GOLGA8MH3BSY2 632 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 NPY2RP49146 381 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 ARF5P84085 180 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 NSUN2Q08J23 767 aaKnown RBP eCLIP21■□□□□ 0.95
SMCO4-201ENST00000298966 ZNF284Q2VY69 593 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 ZNF542PQ5EBM4 170 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 PIP5KL1Q5T9C9 394 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 ZBED8Q8IZ13 594 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 FAM174AQ8TBP5 190 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 PWWP2AQ96N64 755 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 TMEM109Q9BVC6 243 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 CAAP1Q9H8G2 361 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 NCKIPSDQ9NZQ3 722 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 TRPM6Q9BX84 2022 aa21■□□□□ 0.95
SMCO4-201ENST00000298966 CPED1A4D0V7 1026 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 SYF2O95926 243 aaKnown RBP20.99■□□□□ 0.95
SMCO4-201ENST00000298966 CLDN2P57739 230 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 CDH17Q12864 832 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 NFATC3Q12968 1075 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 SLC29A2Q14542 456 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 BBS9Q3SYG4 887 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 ZCCHC8Q6NZY4 707 aaKnown RBP20.99■□□□□ 0.95
SMCO4-201ENST00000298966 FOXR1Q6PIV2 292 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 GCNT7Q6ZNI0 430 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 ZNF534Q76KX8 674 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 ABI3BPQ7Z7G0 1075 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 CAND1Q86VP6 1230 aaKnown RBP20.99■□□□□ 0.95
SMCO4-201ENST00000298966 DCP2Q8IU60 420 aaKnown RBP20.99■□□□□ 0.95
SMCO4-201ENST00000298966 ARL14Q8N4G2 192 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 GOLGA6L1Q8N7Z2 621 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 TADA1Q96BN2 335 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 GORASP1Q9BQQ3 440 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 CCDC77Q9BR77 488 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 MLPHQ9BV36 600 aaPredicted RBP20.99■□□□□ 0.95
SMCO4-201ENST00000298966 CASS4Q9NQ75 786 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 DYRK4Q9NR20 520 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 BFARQ9NZS9 450 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 IL17BQ9UHF5 180 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 VPS51Q9UID3 782 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 TTLL3Q9Y4R7 772 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 ENTPD2Q9Y5L3 495 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 TEX264Q9Y6I9 313 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 RP1P56715 2156 aa20.99■□□□□ 0.95
SMCO4-201ENST00000298966 A0A087WUV0 522 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 452.8 ms