RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ATP6V1B2P21281 511 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 FDXRP22570 491 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 FASP25445 335 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CAPGP40121 348 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 SERPINH1P50454 418 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 UNC50Q53HI1 259 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ISCA2Q86U28 154 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 TEX26Q8N6G2 289 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 OR13J1Q8NGT2 312 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 RAB2BQ8WUD1 216 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CENPNQ96H22 339 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 MYRFLQ96LU7 910 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 ZNF347Q96SE7 839 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 RTP3Q9BQQ7 232 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 TRIM54Q9BYV2 358 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 NANOGQ9H9S0 305 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 GPN2Q9H9Y4 310 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 SDR39U1Q9NRG7 319 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CCDC167Q9P0B6 97 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ZNF639Q9UID6 485 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 PSME2Q9UL46 239 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 DHRS12A0PJE2 317 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 NEMP2A6NFY4 417 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 RASAL1O95294 804 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 S1PR4O95977 384 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ALDOCP09972 364 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 PABPC1P11940 636 aaKnown RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 MATN1P21941 496 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 SLC7A2P52569 658 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 WNT3AP56704 352 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 PPP1R3AQ16821 1122 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CCNYL2Q5T2Q4 361 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 TMTC4Q5T4D3 741 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 UMODL1-AS1Q8N2C9 162 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 DHRSXQ8N5I4 330 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 MYLPFQ96A32 169 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 FBXL20Q96IG2 436 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 MTG1Q9BT17 334 aaPredicted RBP10.34□□□□□ -0.75
SKA1-201ENST00000285116 MUC3BQ9H195 1237 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 CHST12Q9NRB3 414 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 RBM22Q9NW64 420 aaKnown RBP eCLIP10.34□□□□□ -0.75
SKA1-201ENST00000285116 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 AURKCQ9UQB9 309 aa10.34□□□□□ -0.75
SKA1-201ENST00000285116 SPEGQ15772 3267 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 REV3LO60673 3130 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 TYW5A2RUC4 315 aaKnown RBP10.33□□□□□ -0.76
SKA1-201ENST00000285116 FXYD1O00168 92 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 NME4O00746 187 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 ALOX5P09917 674 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PRR35P0CG20 571 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 UMPSP11172 480 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 CTGFP29279 349 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 CCR1P32246 355 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 ETFBP38117 255 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PSEN2P49810 448 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 CCT8P50990 548 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PGGT1BP53609 377 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 CD300CQ08708 224 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 ZNF846Q147U1 533 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 USP33Q8TEY7 942 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 EDEM1Q92611 657 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 NRBF2Q96F24 287 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 ALPK1Q96QP1 1244 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 POLR3BQ9NW08 1133 aaPredicted RBP10.33□□□□□ -0.76
SKA1-201ENST00000285116 SUN2Q9UH99 717 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 SFMBT1Q9UHJ3 866 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PFDN6O15212 129 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PAGE1O75459 146 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 SEC14L2O76054 403 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 NPPAP01160 153 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PSMA4P25789 261 aaKnown RBP10.33□□□□□ -0.76
SKA1-201ENST00000285116 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
SKA1-201ENST00000285116 ZNF773Q6PK81 442 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 MIER2Q8N344 545 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 TMCO5AQ8N6Q1 288 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 HGH1Q9BTY7 390 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 C1QTNF3Q9BXJ4 246 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 SEZ6LQ9BYH1 1024 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 SMPD3Q9NY59 655 aaPredicted RBP10.33□□□□□ -0.76
SKA1-201ENST00000285116 DSEQ9UL01 958 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 Q9Y3F1 56 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 PCDHA9Q9Y5H5 950 aa10.33□□□□□ -0.76
SKA1-201ENST00000285116 GREB1Q4ZG55 1949 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 CLDN25C9JDP6 229 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 AURKAO14965 403 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 MBL2P11226 248 aaPredicted RBP10.32□□□□□ -0.76
SKA1-201ENST00000285116 ODC1P11926 461 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 NFKBIAP25963 317 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 RENBPP51606 427 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 BEX3Q00994 111 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 CRHR2Q13324 411 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 LAYNQ6UX15 382 aa10.32□□□□□ -0.76
SKA1-201ENST00000285116 PRR23BQ6ZRT6 265 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms