RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 AQP12BA6NM10 295 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 YJEFN3A6XGL0 299 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 XYLBO75191 536 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 HLCSP50747 726 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 STX1BP61266 288 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 SH3BP2P78314 561 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 MRPS6P82932 125 aaKnown RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 AQP12AQ8IXF9 295 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TMCO5AQ8N6Q1 288 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 EDEM1Q92611 657 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NSUN5Q96P11 429 aaKnown RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 SLC30A3Q99726 388 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 RHOBTB2Q9BYZ6 727 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 CACNG4Q9UBN1 327 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 DAPK2Q9UIK4 370 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 RAD54BQ9Y620 910 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 A8MU76 341 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 DFFAO00273 331 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NOL3O60936 208 aaKnown RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 RFC2P35250 354 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 ECT2LQ008S8 904 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 MGAT3Q09327 533 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 POLD3Q15054 466 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TRIM16LQ309B1 348 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 PCID2Q5JVF3 399 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TMTC4Q5T4D3 741 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 C9orf57Q5W0N0 161 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 LCN8Q6JVE9 175 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 HACD2Q6Y1H2 254 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 GPRIN1Q7Z2K8 1008 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 CNTN4Q8IWV2 1026 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TRUB1Q8WWH5 349 aaKnown RBP11.3□□□□□ -0.6
SCLT1-201ENST00000281142 HDAC11Q96DB2 347 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TBL1YQ9BQ87 522 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NFKBIZQ9BYH8 718 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 NDEL1Q9GZM8 345 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 VPS51Q9UID3 782 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 SPO11Q9Y5K1 396 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 DNAJC15Q9Y5T4 150 aa11.3□□□□□ -0.6
SCLT1-201ENST00000281142 TTC24A2A3L6 582 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ERI2A8K979 691 aaKnown RBP11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PIP5K1BO14986 540 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 MAN1A2O60476 641 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CLPXO76031 633 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CPNE6O95741 557 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CKBP12277 381 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 TCF3P15923 654 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CASP2P42575 452 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ACADSBP45954 432 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CXCR3P49682 368 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 GSK3BP49841 420 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 MAP3K7CLP57077 242 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ADARB1P78563 741 aaKnown RBP11.29□□□□□ -0.6
SCLT1-201ENST00000281142 IFITM3Q01628 133 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 TLE2Q04725 743 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ACAP2Q15057 778 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 KCNJ8Q15842 424 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 INAQ16352 499 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PSMD5Q16401 504 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PHKG1Q16816 387 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 GPR158Q5T848 1215 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 USP51Q70EK9 711 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CLIP3Q96DZ5 547 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 HERC2P3Q9BVR0 1158 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ULBP1Q9BZM6 244 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 NXF3Q9H4D5 531 aaKnown RBP11.29□□□□□ -0.6
SCLT1-201ENST00000281142 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 NSMCE4AQ9NXX6 385 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PKD2L2Q9NZM6 624 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ACTR3BQ9P1U1 418 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 TSC2P49815 1807 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 ANGPT2O15123 496 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 LRIG2O94898 1065 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 PCNAP12004 261 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 TKTL1P51854 596 aa11.29□□□□□ -0.6
SCLT1-201ENST00000281142 DIO3P55073 304 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms