RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ARMC12Q5T9G4 340 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 TMEM215Q68D42 235 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 EPGNQ6UW88 154 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 LYSMD3Q7Z3D4 306 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 METTL3Q86U44 580 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 VOPP1Q96AW1 172 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 PTERQ96BW5 349 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 RPL10LQ96L21 214 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 ILKAPQ9H0C8 392 aaPredicted RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 ALG9Q9H6U8 611 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 GTSE1Q9NYZ3 720 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 HS3ST2Q9Y278 367 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 FNDC3AQ9Y2H6 1198 aaKnown RBP20.87■□□□□ 0.93
YBX3-202ENST00000279550 SLC27A6Q9Y2P4 619 aa20.87■□□□□ 0.93
YBX3-202ENST00000279550 PRR5-ARHGAP8B1AHC4 643 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ANHXE9PGG2 379 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 GRID2O43424 1007 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 MBTPS2O43462 519 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ZBTB14O43829 449 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 HNRNPCL1O60812 293 aaKnown RBP20.86■□□□□ 0.93
YBX3-202ENST00000279550 ESRRAP11474 423 aaPredicted RBP20.86■□□□□ 0.93
YBX3-202ENST00000279550 FOSL2P15408 326 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 CPA2P48052 419 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ARHGAP8P85298 464 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ECT2LQ008S8 904 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ACAP2Q15057 778 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 TRIM67Q6ZTA4 783 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 GUCD1Q96NT3 240 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 HACD3Q9P035 362 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 IL17CQ9P0M4 197 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 ZDHHC2Q9UIJ5 367 aa20.86■□□□□ 0.93
YBX3-202ENST00000279550 APOBEC2Q9Y235 224 aaKnown RBP20.86■□□□□ 0.93
YBX3-202ENST00000279550 HTRA2O43464 458 aaPredicted RBP20.85■□□□□ 0.93
YBX3-202ENST00000279550 NPHS1O60500 1241 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 ATP6V1G2O95670 118 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 RBP1P09455 135 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 SRCP12931 536 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 CALB2P22676 271 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 SLC26A3P40879 764 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 CSNK1DP48730 415 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 XIAPP98170 497 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 KLC3Q6P597 504 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 ISCA2Q86U28 154 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 RAB3IPQ96QF0 476 aaPredicted RBP20.85■□□□□ 0.93
YBX3-202ENST00000279550 CADM1Q9BY67 442 aaKnown RBP20.85■□□□□ 0.93
YBX3-202ENST00000279550 GALPQ9UBC7 116 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 SLC25A13Q9UJS0 675 aa20.85■□□□□ 0.93
YBX3-202ENST00000279550 ARNTLO00327 626 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 MATN2O00339 956 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 GPR39O43194 453 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 NDUFS3O75489 264 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 RHOBTB1O94844 696 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 CD1DP15813 335 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 POLR2EP19388 210 aaKnown RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 RASSF2P50749 326 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 RPL14P50914 215 aaKnown RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 BCL2L1Q07817 233 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 ASPHQ12797 758 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 ILF2Q12905 390 aaKnown RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 ZRANB3Q5FWF4 1079 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 RPS27LQ71UM5 84 aaKnown RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 ZSWIM9Q86XI8 627 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 FBXO27Q8NI29 283 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 OR52B2Q96RD2 323 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 TCF12Q99081 682 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 POPDC3Q9HBV1 291 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 MAGEE1Q9HCI5 957 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 DEC1Q9P2X7 70 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 COL4A3Q01955 1670 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 H3BMM5 538 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 OR1I1O60431 355 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 IGSF6O95976 241 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 ZNF37AP17032 561 aaPredicted RBP20.84■□□□□ 0.93
YBX3-202ENST00000279550 SLC6A11P48066 632 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 MESP2Q0VG99 397 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 PRKAA1Q13131 559 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 CFAP157Q5JU67 520 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 WFIKKN2Q8TEU8 576 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 BIRC8Q96P09 236 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 BTBD10Q9BSF8 475 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 GPR63Q9BZJ6 419 aa20.84■□□□□ 0.93
YBX3-202ENST00000279550 C2CD4DB7Z1M9 353 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 H7C0S8 307 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 SRP72O76094 671 aaKnown RBP20.83■□□□□ 0.92
YBX3-202ENST00000279550 GJA4P35212 333 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 RIPK1Q13546 671 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 OR4D1Q15615 310 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 PTPRNQ16849 979 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 RYBPQ8N488 228 aaPredicted RBP20.83■□□□□ 0.92
YBX3-202ENST00000279550 HLA-CQ95604 372 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 SLC30A3Q99726 388 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 OSBPL1AQ9BXW6 950 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 TAS2R1Q9NYW7 299 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 NCKIPSDQ9NZQ3 722 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 TAGLN3Q9UI15 199 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 IKZF3Q9UKT9 509 aa20.83■□□□□ 0.92
YBX3-202ENST00000279550 TMEM233B4DJY2 109 aa20.82■□□□□ 0.92
YBX3-202ENST00000279550 IPO13O94829 963 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms