RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TAAR2Q9P1P5 351 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 IMPACTQ9P2X3 320 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ATXN7L1Q9ULK2 861 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF106Q9H2Y7 1883 aaKnown RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 MACROD2A1Z1Q3 448 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 CCDC66A2RUB6 948 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 HACD1B0YJ81 288 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 DNAJC6O75061 913 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 NDST3O95803 873 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 PYGLP06737 847 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 PYGMP11217 842 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 RBL1P28749 1068 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 PTPN7P35236 360 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 ILF3Q12906 894 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 SLC30A9Q6PML9 568 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 IGF2-ASQ6U949 168 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 C17orf82Q86X59 251 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 Q8N9G6 341 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 ACTL9Q8TC94 416 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 MRGPRX2Q96LB1 330 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 SLC46A1Q96NT5 459 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 FAM118BQ9BPY3 351 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 OSBPL8Q9BZF1 889 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 MAGEE1Q9HCI5 957 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 KLHL8Q9P2G9 620 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 APPL1Q9UKG1 709 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 PACSIN2Q9UNF0 486 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-201ENST00000275036 EFR3BQ9Y2G0 817 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
HMGN3-201ENST00000275036 RGSL1A5PLK6 1076 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 RRP8O43159 456 aaKnown RBP14.31□□□□□ -0.12
HMGN3-201ENST00000275036 MTSS1O43312 755 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 SLC4A1P02730 911 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 GLB1P16278 677 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 CHRNA4P43681 627 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 WNT3AP56704 352 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 RWDD2BP57060 319 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 PCBP4P57723 403 aaKnown RBP14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ERVPABLB-1P60509 514 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 XRCC4Q13426 336 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ALS2CLQ60I27 953 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 FOXR1Q6PIV2 292 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 LRRC69Q6ZNQ3 347 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 PID1Q7Z2X4 250 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 SPRED1Q7Z699 444 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 CCNJLQ8IV13 435 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 NAGSQ8N159 534 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF248Q8NDW4 579 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 OR6C4Q8NGE1 309 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ZDHHC1Q8WTX9 485 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 OR2M4Q96R27 311 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 FCRL5Q96RD9 977 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ARFGAP3Q9NP61 516 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 LRIT1Q9P2V4 623 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 PRKAB1Q9Y478 270 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 PCDHGA8Q9Y5G5 932 aa14.31□□□□□ -0.12
HMGN3-201ENST00000275036 ATMQ13315 3056 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ATRXP46100 2492 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 CCDC187A0A096LP49 1063 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 H7C0C1 242 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 DDX3YO15523 660 aaKnown RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 NUDT21O43809 227 aaKnown RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ASMTLO95671 621 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ECEL1O95672 775 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 HGFP14210 728 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 BPIP17213 487 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ACTR1BP42025 376 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ATP5OP48047 213 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 DCDC1P59894 354 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ACTR1AP61163 376 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF648Q5T619 568 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 SLC25A41Q8N5S1 370 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 WDR36Q8NI36 951 aaKnown RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 GRAMD1AQ96CP6 724 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 LIN37Q96GY3 246 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 FCRL3Q96P31 734 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 VAT1Q99536 393 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 SPATA16Q9BXB7 569 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 GPR63Q9BZJ6 419 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 CDH19Q9H159 772 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 EPB41L5Q9HCM4 733 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 VPS18Q9P253 973 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 NFKBIL1Q9UBC1 381 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-201ENST00000275036 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
HMGN3-201ENST00000275036 CAPN6Q9Y6Q1 641 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms