RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TTC23LQ6PF05 361 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 DOK6Q6PKX4 331 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 ZNF781Q8N8C0 355 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CDC26Q8NHZ8 85 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 RDH11Q8TC12 318 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 MZB1Q8WU39 189 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CCDC124Q96CT7 223 aaKnown RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 OLFM1Q99784 485 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 TACO1Q9BSH4 297 aaKnown RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 PLAC1Q9HBJ0 212 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 MAGEE1Q9HCI5 957 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 PRKAG3Q9UGI9 489 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 NPEPPSL1A6NEC2 478 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 OR2AG2A6NM03 316 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 TRPC5OSA6NMA1 111 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 H0Y3Z8 333 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 UBXN8O00124 270 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 AIM2O14862 343 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CACNG3O60359 315 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 ASLP04424 464 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 DGKAP23743 735 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 HOXA9P31269 272 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 HMGCLP35914 325 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CCNFP41002 786 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 ETV4P43268 484 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 GPR1P46091 355 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 PSMD8P48556 350 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 PRKAA2P54646 552 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 ERVK-21P61565 698 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CCDC15Q0P6D6 951 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 ACAP2Q15057 778 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 ZYG11AQ6WRX3 759 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 Q6ZVL8 140 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 WFIKKN2Q8TEU8 576 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 SCAMP4Q969E2 229 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 TMEM159Q96B96 161 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 AP2M1Q96CW1 435 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 WDR55Q9H6Y2 383 aaPredicted RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 IL36AQ9UHA7 158 aa9.27□□□□□ -0.93
SSR3-201ENST00000265044 INTS6Q9UL03 887 aaKnown RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 YBX2Q9Y2T7 364 aaKnown RBP9.27□□□□□ -0.93
SSR3-201ENST00000265044 A0A1W2PQ67 120 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 H3BMM5 538 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ARHGEF15O94989 841 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ESR1P03372 595 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ILF2Q12905 390 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 Q6ZNB5 142 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 RPS27LQ71UM5 84 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 RTL10Q7L3V2 364 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 SNX20Q7Z614 316 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 DCBLD1Q8N8Z6 715 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ELMO1Q92556 727 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 AARSD1Q9BTE6 412 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 THTPAQ9BU02 230 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CACNA2D2Q9NY47 1150 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 RAP2CQ9Y3L5 183 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 MYO16Q9Y6X6 1858 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 RAD51BO15315 384 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 DLX3O60479 287 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 PGM1P36871 562 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CDKN2DP55273 166 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 NME5P56597 212 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ATP6V0D1P61421 351 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ACTN3Q08043 901 aaPredicted RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 BRAT1Q6PJG6 821 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 LONP2Q86WA8 852 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 PIANPQ8IYJ0 282 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CXorf40AQ8TE69 158 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 PEX13Q92968 403 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CATSPER2Q96P56 530 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 MYOCQ99972 504 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 HGH1Q9BTY7 390 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 FAM126AQ9BYI3 521 aaPredicted RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 NMUR2Q9GZQ4 415 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 NSUN3Q9H649 340 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 COG4Q9H9E3 785 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ARL15Q9NXU5 204 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 SIRPGQ9P1W8 387 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 PCDHB1Q9Y5F3 818 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 SLCO1B7G3V0H7 640 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 HDAC3O15379 428 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 OLFM2O95897 454 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 CYP17A1P05093 508 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 TIE1P35590 1138 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 RPL26P61254 145 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 SPDYAQ5MJ70 313 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 TRMT11Q7Z4G4 463 aaKnown RBP9.26□□□□□ -0.93
SSR3-201ENST00000265044 SPNS2Q8IVW8 549 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 SNX31Q8N9S9 440 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 ADAMTS19Q8TE59 1207 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 FATE1Q969F0 183 aa9.26□□□□□ -0.93
SSR3-201ENST00000265044 MARK4Q96L34 752 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms