RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CFAP52Q8N1V2 620 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 UMODL1-AS1Q8N2C9 162 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 KDM1BQ8NB78 822 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 ZSCAN1Q8NBB4 408 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 UHMK1Q8TAS1 419 aaKnown RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 KLK6Q92876 244 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 MYEOVQ96EZ4 313 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 LMLNQ96KR4 655 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SYNDIG1Q9H7V2 258 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 DNAJC28Q9NX36 388 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 GOLGA6AQ9NYA3 693 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SLCO3A1Q9UIG8 710 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 TRHDEQ9UKU6 1024 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 ICE1Q9Y2F5 2266 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 DOCK9Q9BZ29 2069 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 A0A087WUV0 522 aaPredicted RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 APRTP07741 180 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 SRPRAP08240 638 aaKnown RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 MAGEA3P43357 314 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 NDST2P52849 883 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 CDH18Q13634 790 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 RNF219Q5W0B1 726 aaPredicted RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 PID1Q7Z2X4 250 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 CAND1Q86VP6 1230 aaKnown RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 TMEM145Q8NBT3 493 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 OR13H1Q8NG92 308 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 FIBINQ8TAL6 211 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 PYROXD1Q8WU10 500 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 PTPRN2Q92932 1015 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 PGM2Q96G03 612 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 LIN37Q96GY3 246 aaPredicted RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 WDR83Q9BRX9 315 aaKnown RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 NDFIP2Q9NV92 336 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 ZNF212Q9UDV6 495 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 PLEKHB1Q9UF11 243 aaPredicted RBP13.31□□□□□ -0.28
SGCA-201ENST00000262018 PCDHGA7Q9Y5G6 932 aa13.31□□□□□ -0.28
SGCA-201ENST00000262018 E7EVH7 732 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 KCNK1O00180 336 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 DFFAO00273 331 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 PLD2O14939 933 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 SLC7A4O43246 635 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 RNGTTO60942 597 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 CLDN11O75508 207 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 BANF1O75531 89 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 LUC7L3O95232 432 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 PSMB4P28070 264 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CASRP41180 1078 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 IRAK1P51617 712 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CDH4P55283 916 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 CCDC38Q502W7 563 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 TNFAIP8L3Q5GJ75 292 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 PITRM1Q5JRX3 1037 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 PERM1Q5SV97 790 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ZNF534Q76KX8 674 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 FBXO39Q8N4B4 442 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CARNMT1Q8N4J0 409 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ATPAF2Q8N5M1 289 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 ATP11CQ8NB49 1132 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 FBXO36Q8NEA4 188 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 FAM76AQ8TAV0 307 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 FATE1Q969F0 183 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 TLCD1Q96CP7 247 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 LRRC39Q96DD0 335 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 RPL10LQ96L21 214 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 TEKT5Q96M29 485 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 IL12RB2Q99665 862 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CEP41Q9BYV8 373 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 GBA3Q9H227 469 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 NOL6Q9H6R4 1146 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 FZD3Q9NPG1 666 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 NCKIPSDQ9NZQ3 722 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 KLHL8Q9P2G9 620 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 TEX264Q9Y6I9 313 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 RELNP78509 3460 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 EME2A4GXA9 379 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 MUSKO15146 869 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 MATN3O15232 486 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 MAFKO60675 156 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CNTN5O94779 1100 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 IVLP07476 585 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 LIPCP11150 499 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 MLNP12872 115 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 CD68P34810 354 aaPredicted RBP13.3□□□□□ -0.28
SGCA-201ENST00000262018 UGT1A5P35504 534 aa13.3□□□□□ -0.28
SGCA-201ENST00000262018 MAPKAPK2P49137 400 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms