RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TRMT10BQ6PF06 316 aaKnown RBP20.58■□□□□ 0.89
RTCA-201ENST00000260563 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 GCNT7Q6ZNI0 430 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 RABEPKQ7Z6M1 372 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 OR4K2Q8NGD2 314 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 C1orf216Q8TAB5 229 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 STYXQ8WUJ0 223 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 CERS2Q96G23 380 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 PLEKHG4BQ96PX9 1271 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 FAM83DQ9H4H8 585 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 ACSS3Q9H6R3 686 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 TMEM74BQ9NUR3 256 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 HS3ST3A1Q9Y663 406 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 ADAMTS9Q9P2N4 1935 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 A0A1B0GTW7 788 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 A6NNZ2 444 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 PRR5-ARHGAP8B1AHC4 643 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 H0Y8X5 98 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 LMNAP02545 664 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 HADHAP40939 763 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 AFF3P51826 1226 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 EIF3BP55884 814 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 CLDN2P57739 230 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 DPTQ07507 201 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 PTPRCAPQ14761 206 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 SKIDA1Q1XH10 827 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 HENMT1Q5T8I9 393 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 KIAA0930Q6ICG6 404 aaPredicted RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 KYAT3Q6YP21 454 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 PTAR1Q7Z6K3 402 aaPredicted RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 UNC5BQ8IZJ1 945 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 GPR26Q8NDV2 337 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 OR13C4Q8NGS5 318 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 OR13J1Q8NGT2 312 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 FAM174AQ8TBP5 190 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 SCAMP4Q969E2 229 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 RUFY1Q96T51 708 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 C19orf43Q9BQ61 176 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 CCDC77Q9BR77 488 aa20.58■□□□□ 0.88
RTCA-201ENST00000260563 RIOK2Q9BVS4 552 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 PPANQ9NQ55 473 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 FNDC3AQ9Y2H6 1198 aaKnown RBP20.58■□□□□ 0.88
RTCA-201ENST00000260563 BPTFQ12830 3046 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 PYGLP06737 847 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 CD38P28907 300 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 MPLP40238 635 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 TMPRSS15P98073 1019 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 ACVR1Q04771 509 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 LONRF1Q17RB8 773 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 KLHL38Q2WGJ6 581 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 KBTBD12Q3ZCT8 623 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 ZNF449Q6P9G9 518 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 PLA2G15Q8NCC3 412 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 DNAJC1Q96KC8 554 aaKnown RBP20.57■□□□□ 0.88
RTCA-201ENST00000260563 CYTH2Q99418 400 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 ZSCAN5AQ9BUG6 496 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 SPATA16Q9BXB7 569 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 ARRDC1-AS1Q9H2J1 176 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 C20orf96Q9NUD7 363 aaPredicted RBP20.57■□□□□ 0.88
RTCA-201ENST00000260563 NLE1Q9NVX2 485 aaPredicted RBP20.57■□□□□ 0.88
RTCA-201ENST00000260563 IL1RAPL1Q9NZN1 696 aa20.57■□□□□ 0.88
RTCA-201ENST00000260563 LRP4O75096 1905 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 EXOC1LA0A1B0GW35 172 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 POM121BA6NF01 834 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 C1QAP02745 245 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 RETP07949 1114 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 GPR1P46091 355 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 NHLH1Q02575 133 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 TEAD4Q15561 434 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 PDPK2PQ6A1A2 396 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 PNCKQ6P2M8 343 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 ABI3BPQ7Z7G0 1075 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 NLRP8Q86W28 1048 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 KCNMB4Q86W47 210 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 CEP76Q8TAP6 659 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 ACBD3Q9H3P7 528 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 FKBPLQ9UIM3 349 aa20.56■□□□□ 0.88
RTCA-201ENST00000260563 CACNA1EQ15878 2313 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 GLYATL1P3A0A0U1RQE8 302 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 FAM159BA6NKW6 160 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 K7ESM1 405 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 VAPBO95292 243 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 IVLP07476 585 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 ERVK-10P10266 1014 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 PSMA3P25788 255 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 RABIFP47224 123 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 ARCN1P48444 511 aaKnown RBP20.55■□□□□ 0.88
RTCA-201ENST00000260563 ZNF844Q08AG5 666 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 MGAT5Q09328 741 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 INPP5AQ14642 412 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 EFTUD2Q15029 972 aaKnown RBP eCLIP20.55■□□□□ 0.883e-22■■■■■ 65.1
RTCA-201ENST00000260563 DUOXA1Q1HG43 343 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 LAYNQ6UX15 382 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 FAM151BQ6UXP7 276 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 IQCHQ86VS3 1027 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 PELI3Q8N2H9 469 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 TRAM1L1Q8N609 369 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 MFSD2AQ8NA29 543 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 CDKL2Q92772 493 aa20.55■□□□□ 0.88
RTCA-201ENST00000260563 SKA1Q96BD8 255 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms