RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 RNASEH1O60930 286 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 PRDX6P30041 224 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMEM198Q66K66 360 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 TRMT11Q7Z4G4 463 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 GPR180Q86V85 440 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCDC36Q8IYA8 594 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 PIK3R3Q92569 461 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 HDAC10Q969S8 669 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 TP53INP1Q96A56 240 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 SERPINB11Q96P15 392 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 CSPG4P5Q96PW8 444 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC38A2Q96QD8 506 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 GAD1Q99259 594 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 SPON1Q9HCB6 807 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 TNPO3Q9Y5L0 923 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 A0A0G2JPF8 293 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 HNRNPCL3B7ZW38 293 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 ITM2AO43736 263 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 HNRNPCL4P0DMR1 293 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 FGFR1P11362 822 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 CETPP11597 493 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 POLR2EP19388 210 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 SYT16Q17RD7 645 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC39A12Q504Y0 691 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 PHC3Q8NDX5 983 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 PIGKQ92643 395 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 POLR1EQ9GZS1 481 aaKnown RBP9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 ITM2CQ9NQX7 267 aa9.71□□□□□ -0.86
CTDSPL2-201ENST00000260327 TCRBV7S3A2A0A539 114 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 AURKAO14965 403 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 LGALS2P05162 132 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ITGA2P17301 1181 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RNF44Q7L0R7 432 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 DET1Q7L5Y6 550 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 BCL2L14Q9BZR8 327 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 SLC17A6Q9P2U8 582 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PLCL2Q9UPR0 1127 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 FABP12A6NFH5 140 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 H0YGN5 161 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 FBP2O00757 339 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MFSD11O43934 449 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MTRF1O75570 445 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CKMP06732 381 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CD36P16671 472 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 WEE1P30291 646 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MATKP42679 507 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 OMPP47874 163 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CEBPGP53567 150 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAB15P59190 212 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CCSAPQ6IQ19 270 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 OTOP3Q7RTS5 596 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 TWIST2Q8WVJ9 160 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RASSF5Q8WWW0 418 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MFSD3Q96ES6 412 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MAGEE1Q9HCI5 957 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 NFS1Q9Y697 457 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 hCG_2039718K7EN88 272 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZW10O43264 779 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PLIN3O60664 434 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CSH1P0DML2 217 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 CSH2P0DML3 217 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ALDH7A1P49419 539 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 IRF8Q02556 426 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ELP6Q0PNE2 266 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 E2F2Q14209 437 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF460Q14592 562 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 UNC93AQ86WB7 457 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MOSPD2Q8NHP6 518 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 TMCO6Q96DC7 493 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ITCHQ96J02 903 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 HSFY1Q96LI6 401 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 GLT1D1Q96MS3 346 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 HIPK3Q9H422 1215 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 POU2F1P14859 743 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MAPK12P53778 367 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 OAZ1P54368 228 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 GALNT3Q14435 633 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 ZNF267Q14586 743 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MINDY2Q8NBR6 621 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 TFAP2BQ92481 460 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 USP7Q93009 1102 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 AMBNQ9NP70 447 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 MYH6P13533 1939 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 H7C0S8 307 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 HADHBP55084 474 aaKnown RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PRKD1Q15139 912 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PTPRNQ16849 979 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 PIK3R6Q5UE93 754 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 RAP1GAP2Q684P5 730 aa9.7□□□□□ -0.86
CTDSPL2-201ENST00000260327 NKAPQ8N5F7 415 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms