RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ACAP2Q15057 778 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 LARP4Q71RC2 724 aaKnown RBP eCLIP14.28□□□□□ -0.12
SFXN3-201ENST00000224807 CCDC103Q8IW40 242 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 OTUD5Q96G74 571 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 DMRTB1Q96MA1 342 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 MEAF6Q9HAF1 191 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 HMG20AQ9NP66 347 aa14.28□□□□□ -0.12
SFXN3-201ENST00000224807 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.28□□□□□ -0.12
SFXN3-201ENST00000224807 ASB14A6NK59 587 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 HBP1O60381 514 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.12
SFXN3-201ENST00000224807 CD86P42081 329 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 HLCSP50747 726 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 KPNA2P52292 529 aaKnown RBP14.27□□□□□ -0.12
SFXN3-201ENST00000224807 ARSFP54793 590 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 ARPP19P56211 112 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 CREB5Q02930 508 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 SMYD5Q6GMV2 418 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 ZNF773Q6PK81 442 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 CCDC80Q76M96 950 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 GALNT10Q86SR1 603 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 ZDHHC13Q8IUH4 622 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.12
SFXN3-201ENST00000224807 CENPIQ92674 756 aaPredicted RBP14.27□□□□□ -0.12
SFXN3-201ENST00000224807 FEM1CQ96JP0 617 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 TBATAQ96M53 351 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 BDH2Q9BUT1 245 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 RIBC2Q9H4K1 309 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 POLG2Q9UHN1 485 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 VWA7Q9Y334 891 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 BOLA1Q9Y3E2 137 aa14.27□□□□□ -0.12
SFXN3-201ENST00000224807 LAMA2P24043 3122 aaKnown RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 MITFO75030 526 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 C22orf31O95567 290 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 C1RP00736 705 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 DPEP1P16444 411 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 ZNF37AP17032 561 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 OAZ1P54368 228 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 SOX4Q06945 474 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 UNC50Q53HI1 259 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 COLEC12Q5KU26 742 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 UBE2UQ5VVX9 321 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 ENPP6Q6UWR7 440 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 SPATC1Q76KD6 591 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 MICU2Q8IYU8 434 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 OR13F1Q8NGS4 319 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 STARD8Q92502 1023 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 MAGED4Q96JG8 741 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.13
SFXN3-201ENST00000224807 BBS2Q9BXC9 721 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 ACTR3BQ9P1U1 418 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 ADAMTS5Q9UNA0 930 aa14.27□□□□□ -0.13
SFXN3-201ENST00000224807 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 MAGEB16A2A368 324 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 TBC1D4O60343 1298 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SEC24AO95486 1093 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CST1P01037 141 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CAPNS1P04632 268 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 HLA-DQB2P05538 268 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 INHBBP09529 407 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 DBTP11182 482 aaKnown RBP14.26□□□□□ -0.13
SFXN3-201ENST00000224807 PAMP19021 973 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 WNT3AP56704 352 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 EPS8Q12929 822 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 TAF2Q6P1X5 1199 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 TXNDC11Q6PKC3 985 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 THAP5Q7Z6K1 395 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CLYBLQ8N0X4 340 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SPARTQ8N0X7 666 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SLC22A17Q8WUG5 538 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 COLEC11Q9BWP8 271 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 ARMC1Q9NVT9 282 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SEPT3Q9UH03 358 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 PCDHGA3Q9Y5H0 932 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 MYBPHLA2RUH7 354 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CAPN15O75808 1086 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 GSNP06396 782 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 LBPP18428 481 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 TRPC1P48995 793 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 NEK2P51955 445 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 COPZ1P61923 177 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CYP4F2P78329 520 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CHRNB3Q05901 458 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 CYP4F3Q08477 520 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 TRIM32Q13049 653 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SMN1Q16637 294 aaKnown RBP14.26□□□□□ -0.13
SFXN3-201ENST00000224807 KCTD11Q693B1 232 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 RAB44Q7Z6P3 723 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-201ENST00000224807 PLD3Q8IV08 490 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 SCAIQ8N9R8 606 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 MFSD2AQ8NA29 543 aa14.26□□□□□ -0.13
SFXN3-201ENST00000224807 ZNF420Q8TAQ5 688 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-201ENST00000224807 RAB2BQ8WUD1 216 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms