RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Lgals12Q91VD1 314 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ssr2Q9CPW5 183 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Jph3Q9ET77 744 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 4932443I19RikA0A286YE38 169 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Polr2jO08740 117 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 CebpaP53566 359 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Srbd1Q497V5 1015 aaKnown RBP11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mtif3Q9CZD5 276 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kctd4Q9D7X1 259 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Magel2Q9QZ04 1284 aa11.91□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm5849J3QPE5 117 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q3KQP7 184 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ipcef1Q5DU31 406 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nudt13Q8JZU0 352 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sbk1Q8QZX0 417 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dcun1d5Q9CXV9 237 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 FancgQ9EQR6 623 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cpsf6Q6NVF9 551 aaKnown RBP11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 BC061212Q6P8K3 481 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr1152Q7TR34 310 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ldhal6bQ8BVP2 382 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q8CD60 292 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Unc93b1Q8VCW4 598 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pacsin3Q99JB8 424 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zc3h13E9Q784 1729 aaKnown RBP11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sppl2cA2A6C4 690 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dpy19l4A2AJQ3 722 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kcnj5P48545 419 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ldoc1Q7TPY9 151 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ube2q1Q7TSS2 422 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr1487Q8VFQ6 315 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn2r125D3Z3M1 369 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Alas2P08680 587 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gpr65Q61038 337 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sephs1Q8BH69 392 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zc3h10Q8R205 435 aaKnown RBP11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 McmbpQ8R3C0 642 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 DeraQ91YP3 318 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Chst12Q99LL3 419 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr391-psA0A0U1RNJ4 312 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vmn2r67K7N6T2 851 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ikzf2P81183 526 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tmem184cQ3TPR7 525 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tmem151bQ68FE7 561 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mfsd6Q8CBH5 775 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dqx1Q924H9 718 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mat2bQ99LB6 334 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mup13L7N222 235 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Atpif1O35143 106 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Spp1P10923 294 aaKnown RBP11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Znrf3Q5SSZ7 913 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Antxr2Q6DFX2 487 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ahsa1Q8BK64 338 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Panx3Q8CEG0 392 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kremen1Q99N43 473 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 PorcnQ9JJJ7 461 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dgat1Q9Z2A7 498 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ric1Q69ZJ7 1422 aa11.9□□□□□ -0.5
Trim56-201ENSMUST00000054384 ItpkbB2RXC2 942 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 MbP04247 154 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ppp3r1Q63810 170 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem214Q8BM55 687 aaKnown RBP11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Coq9Q8K1Z0 313 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ttc36Q8VBW8 186 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc28a3Q9ERH8 703 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ggta1l1A2AUQ7 319 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gli1P47806 1111 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tgfbr2Q62312 592 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ccdc166S4R181 449 aa11.9□□□□□ -0.51
Trim56-201ENSMUST00000054384 Wscd2D4PHA7 571 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vmn2r118E9Q1C1 853 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Itgb5O70309 798 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cyp2d11P24457 504 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mc4rP56450 332 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 PomkQ3TUA9 349 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Glp2rQ5IXF8 512 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem164Q6PHN7 296 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fgl1Q71KU9 314 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ap4e1Q80V94 1122 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Xlr4aA2BI40 215 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Stra6O70491 670 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Csf2P01587 141 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rgs8Q8BXT1 180 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gjd3Q91YD1 278 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Nek7Q9ES74 302 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Msl3Q9WVG9 525 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc25a14Q9Z2B2 325 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ern2Q9Z2E3 911 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Bmp2P21274 394 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Clca4bQ3UW98 925 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr784Q8VFZ9 319 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mcemp1Q9D8U6 183 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 IgtpQ9DCE9 423 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arfgef2A2A5R2 1792 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Chrna10B2RX82 447 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vav1P27870 845 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Epb42P49222 691 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arf3P61205 181 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arf1P84078 181 aa11.89□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lgals3bpQ07797 577 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms