RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 FshrP35378 692 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tgtp2Q3T9E4 415 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fdxacb1Q3UY23 622 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tgtp1Q62293 415 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tfr2Q9JKX3 798 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fam209A2APA5 170 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr1200A2ATJ4 336 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 MlxO08609 298 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Plekha1Q8BUL6 383 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm4922Q8C0N0 497 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zbed3Q9D0L1 228 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ilf3Q9Z1X4 898 aaKnown RBP16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm14692A2BH01 229 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cfl2P45591 166 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ctps2P70303 586 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Chsy3Q5DTK1 884 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc20a1Q61609 681 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ptrh1Q8BW00 204 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 RtknQ8C6B2 564 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr1353Q8VGU8 309 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ist1Q9CX00 362 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sapcd1Q9CY86 146 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mrps33Q9D2R8 106 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sars2Q9JJL8 518 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mkl2P59759 1080 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc25a23Q6GQS1 467 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ube2q1Q7TSS2 422 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rcn3Q8BH97 328 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cybrd1Q925G2 290 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Haus5Q9D786 619 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Vmn2r70K7N702 854 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Abhd15Q5F2F2 459 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ift52Q62559 426 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dupd1Q8BK84 215 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 QpctQ9CYK2 362 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Prom2Q3UUY6 835 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cpxm2Q9D2L5 764 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Inpp5eQ9JII1 647 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 NsmafO35242 920 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 AoahO35298 574 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 GaaP70699 953 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ankrd13bQ5F259 626 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Plppr4Q7TME0 766 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 KmoQ91WN4 479 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hmgn3Q9DCB1 99 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sh2b2Q9JID9 621 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mkln1O89050 735 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PpieQ9QZH3 301 aaKnown RBP16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm5485A0A1D5RM98 91 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm17174M0QWQ9 212 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ap2m1P84091 435 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PomkQ3TUA9 349 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Efcab3Q80X60 432 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rtp1Q8C8C1 263 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Crispld1Q8CGD2 500 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 D6Wsu163eQ91YN0 552 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 MpstQ99J99 297 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Znf207Q9JMD0 495 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 S1pr4Q9Z0L1 386 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Polr1dP97304 133 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ints10Q8K2A7 710 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cdc40Q9DC48 579 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Xpr1Q9Z0U0 695 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ctbp1O88712 441 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PdgfrbP05622 1098 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 EpxP49290 716 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hbs1lQ69ZS7 682 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Bhlhb9Q6PB60 539 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Nemp1Q6ZQE4 437 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Eipr1Q8K0G5 386 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zc3h10Q8R205 435 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Smad9Q9JIW5 430 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tlr4Q9QUK6 835 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fam217bA2AJW5 387 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc9a5B2RXE2 898 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm21972J3QN38 98 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Stfa3P35173 103 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Lhx5P61375 402 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Scgb2b2Q6UGQ3 114 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Txndc11Q8K2W3 948 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gabra4Q9D6F4 552 aa16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Maged1Q9QYH6 775 aaKnown RBP16.52■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Chil5A0A0G2JDS2 431 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pik3cdO35904 1043 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nr4a1P12813 601 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr699Q7TRN3 316 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rbm34Q8C5L7 375 aaKnown RBP16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ppp3r1Q63810 170 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cdc14aQ6GQT0 603 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Scube1Q6NZL8 1018 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Clptm1lQ8BXA5 539 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ctxn3Q8BXZ0 80 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Zbtb6Q8K088 423 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Msl3Q9WVG9 525 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Snx3O70492 162 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gnpda1O88958 289 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Jak1P52332 1153 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gtf2bP62915 316 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Npy2rP97295 381 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Irf6P97431 467 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms