RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Smoc1Q8BLY1 463 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Aqp12Q8CHJ2 290 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Smyd2Q8R5A0 433 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ppa2Q91VM9 330 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q9D454 513 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cib4Q9D9N5 185 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Piwil1Q9JMB7 862 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Peak1Q69Z38 1735 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nsmce4aG3XA30 381 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Vmn2r57L7N269 863 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 NoctO35710 429 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Limk2O54785 638 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Srbd1Q497V5 1015 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr325Q5NCD2 326 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PterQ60866 349 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ndrg1Q62433 394 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dusp11Q6NXK5 321 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr299Q7TS05 330 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Npas4Q8BGD7 802 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Q8BGK9 164 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Csgalnact1Q8BJQ9 530 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fzd10Q8BKG4 582 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nmur2Q8BZ39 395 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tmsb15lQ8C0W0 80 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 TrhdeQ8K093 1025 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 NoboxQ8VIH1 527 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Smap1Q91VZ6 440 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Akr1c21Q91WR5 323 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 PrkxQ922R0 355 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Hmgn3Q9DCB1 99 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Prom1O54990 867 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gas2P11862 314 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rb1P13405 921 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 ChgbP16014 677 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 DmpkP54265 631 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ube2r2Q6ZWZ2 238 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Arhgef38Q80VK6 770 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Rnf208Q8K0W3 265 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tnfaip8l1Q8K288 186 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dapk2Q8VDF3 370 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Htatip2Q9Z2G9 242 aa10.26□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pramef17A2ASJ1 475 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Xlr5aA2BI45 236 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3383J3QQ59 259 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc6a2O55192 617 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Msx2Q03358 267 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Spata48Q5NC83 441 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dnajc11Q5U458 559 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Itga2Q62469 1178 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 4930503B20RikQ80ZP0 234 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dhx36Q8VHK9 1001 aaKnown RBP10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pcdhgb1Q91XX8 918 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam227aQ9D3V8 625 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Izumo2Q9DA16 220 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Olfr706Q9EPF8 316 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Bloc1s6Q9R0C0 172 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Il18rapQ9Z2B1 614 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm45233A0A0N4SVE0 221 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pabpc4lG5E8X2 370 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nckap1P28660 1128 aaKnown RBP10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Impdh1P50096 514 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Stat6P52633 837 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 StacP97306 403 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ddx4Q61496 702 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tmcc2Q80W04 706 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 UstQ8BUB6 407 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slfn5Q8CBA2 884 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Smoc2Q8CD91 447 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 DgkgQ91WG7 788 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tcf7l2Q924A0 459 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pmf1Q9CPV5 202 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 2610042L04RikQ9D073 150 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tomm20lQ9D4V6 152 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Dusp26Q9D700 211 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 NumbQ9QZS3 653 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Skp1Q9WTX5 163 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Itgb6Q9Z0T9 787 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 HephQ9Z0Z4 1157 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Slc25a14Q9Z2B2 325 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm44G3UW88 330 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Zc3h12bG3X9I7 835 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3739L7N296 216 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Matn2O08746 956 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Hipk1O88904 1210 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Tap2P36371 702 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pfkfb2P70265 519 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Ica1P97411 478 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Mc1rQ01727 315 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nudcd1Q6PIP5 582 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fbxo9Q8BK06 437 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Fam221bQ8C627 487 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Map3k21Q8VDG6 1002 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cers2Q924Z4 380 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Nudt8Q9CR24 210 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Cab39lQ9DB16 337 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Pi16Q9ET66 489 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gli3Q61602 1583 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm7792A0A0J9YU01 481 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Btnl4A2CG29 586 aa10.25□□□□□ -0.77
Ccdc40-201ENSMUST00000035935 Gm3183D3YUJ6 481 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms