RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gp5O08742 567 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ckmt1P30275 418 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Itga7Q61738 1179 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nfe2l1Q61985 741 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Clec4b1Q7TS58 209 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lrrc27Q80YS5 523 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ap3s2Q8BSZ2 193 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mkl1Q8K4J6 964 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Isoc1Q91V64 297 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dlg2Q91XM9 852 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mapk8Q91Y86 384 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Elovl6Q920L5 267 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 CatsperzQ9CQP8 194 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Themis3Q9CU24 569 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 NtsQ9D3P9 169 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 H2-Q1O19441 368 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cops4O88544 406 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Bpifa6Q0VGU8 367 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fem1cQ8CEF1 617 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mtrf1Q8K126 446 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Impg1Q8R1W8 798 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 EcdQ9CS74 641 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dcun1d5Q9CXV9 237 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tsga8Q9JJL0 238 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Stap1Q9JM90 297 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Xlr5aA2BI45 236 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Spata6lB2RV46 347 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Itga10E9Q6R1 1167 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sult3a1O35403 293 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 P01740 135 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fgl2P12804 432 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rab23P35288 237 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tnfsf4P43488 198 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Muc1Q02496 630 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Smyd5Q3TYX3 416 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 OgnQ62000 298 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Echs1Q8BH95 290 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MlycdQ99J39 492 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Glod5Q9D8I3 148 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dennd6bQ9D9V7 585 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AdgbG3UZ78 1657 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Has3O08650 554 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rgs5O08850 181 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MafP54843 370 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Brms1lQ3U1T3 323 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nell2Q61220 819 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Wscd1Q80XH4 572 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tfap2dQ91ZK0 452 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Q9DA42 136 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fam122aQ9DB52 284 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kif13aQ9EQW7 1749 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lrrc73B2RWC4 316 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PbsnO08976 174 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cd4P06332 457 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 C1qbP14106 253 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ntf3P20181 258 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AcadlP51174 430 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Wdr75Q3U821 830 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Acvrl1Q61288 502 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Larp4bQ6A0A2 741 aaKnown RBP10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr299Q7TS05 330 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Adgrg7Q8BM96 785 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gin1Q8K259 518 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PglsQ9CQ60 257 aa10.11□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pik3cdO35904 1043 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kcnc2Q14B80 642 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ccdc61Q3UJV1 511 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp953Q3UPV7 304 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm5800Q497L3 186 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fbxo43Q8CDI2 640 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 NeproQ8R2U2 564 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MpstQ99J99 297 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Q9D4A5 307 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Borcs6Q9D6W8 360 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rdh11Q9QYF1 316 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm12394A2AKP6 982 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hsd17b10O08756 261 aaKnown RBP10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AoahO35298 574 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 TpmtO55060 240 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pecam1Q08481 727 aaKnown RBP10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Chrna5Q2MKA5 467 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Actr3bQ641P0 418 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tas2r115Q7M719 310 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr867Q7TRF3 331 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Slc7a4Q8BLQ7 635 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ccser1Q8C0C4 895 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fnbp1lQ8K012 605 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Colec12Q8K4Q8 742 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tpgs1Q99MS8 303 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Atp13a2Q9CTG6 1169 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tmem81Q9D5K1 259 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fabp12Q9DAK4 132 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Aldh9a1Q9JLJ2 494 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyp3a41aQ9JMA7 504 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cdk5rap2Q8K389 1822 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm6509A0A0J9YUV1 481 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Klhl3E0CZ16 587 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kdelc2G5E897 503 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm6351K9J7D1 481 aa10.1□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm6614M0QWR8 670 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms