RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 HexdcQ3U4H6 486 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Ppp1r26Q6A025 1163 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Cdc14bQ6PFY9 485 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Mtrf1lQ8BJU9 373 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Akirin1Q99LF1 191 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Rfc5Q9D0F6 339 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Atad1Q9D5T0 361 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Idh3aQ9D6R2 366 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Igkv5-43A0A0B4J1J2 115 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Lcn6A2AJB9 181 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 LatO54957 242 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Pim3P58750 326 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Aqp1Q02013 269 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Zyg11bQ3UFS0 744 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Ei24Q61070 340 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Mon1aQ6PDG8 556 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Gpr21Q8BX79 349 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Trpv3Q8K424 791 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Epm2aip1Q8VEH5 606 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 TraipQ8VIG6 470 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Rsph14Q9D3W1 341 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Insl5Q9WUG6 135 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 M1apQ9Z0E1 529 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Vmn2r86G5E8Y4 848 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm20828J3KMI7 228 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Rundc3aO08576 446 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Il4i1O09046 630 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 WapP01173 134 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Fam131bQ3TY60 332 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp4f37Q3V1F1 546 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Eps15l1Q60902 907 aaKnown RBP16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 MyorgQ69ZQ1 716 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Lingo3Q6GQU6 589 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Barhl2Q8VIB5 384 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 HnrnpabQ99020 285 aaKnown RBP16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Atp6ap2Q9CYN9 350 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyb5r1Q9DB73 305 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Tor1bQ9ER41 336 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Cdh17Q9R100 827 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 CpqQ9WVJ3 470 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Tnip3A0A1D5RMN0 279 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Arhgap36B1AUC7 590 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Zfr2E9Q5M4 874 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Nedd8P29595 81 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 CapslQ6P8Y1 208 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp2c54Q6XVG2 490 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Itpk1Q8BYN3 419 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Strip2Q8C9H6 844 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Gbp5Q8CFB4 590 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Ifi205aQ8CGE8 404 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Micu1Q8VCX5 477 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Clstn3Q99JH7 956 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Zcchc12Q9CZA5 402 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Shmt2Q9CZN7 504 aaKnown RBP16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Acer3Q9D099 267 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 TcimQ9D915 106 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 Trpc4apQ9JLV2 797 aa16.36■□□□□ 0.21
Shh-201ENSMUST00000002708 TriobpQ99KW3 2014 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 9330159F19RikD3Z623 648 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc6a20bO88575 635 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Cd4P06332 457 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Spp1P10923 294 aaKnown RBP16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gpx3P46412 226 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp2a12P56593 492 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Polr3bP59470 1133 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Mef2aQ60929 498 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Ifi47Q61635 420 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Kiaa1841Q68FF0 718 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Pcsk9Q80W65 694 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Cnpy4Q8BQ47 245 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Ipo13Q8K0C1 963 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc6a20aQ8VDB9 592 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 MvdQ99JF5 401 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Dnaaf1Q9D2H9 634 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Jam2Q9JI59 298 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Tanc1Q0VGY8 1856 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm45861A0A1B0GRY3 1923 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm10406A6NAS4 205 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm3373A6NAS7 205 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Rrn3B2RS91 656 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm3298E9PW80 205 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Zfp558E9Q1J0 407 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm3667K7N757 205 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm6614M0QWR8 670 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 P01669 111 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Stx1bP61264 288 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Fubp3Q3TIX6 575 aaKnown RBP16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm3558Q5FWC9 205 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Sema4aQ62178 760 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Rpp38Q80UU2 280 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Dmtf1Q8CE22 761 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Cox18Q8VC74 331 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Erap1Q9EQH2 930 aa16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Keap1Q9Z2X8 624 aaKnown RBP16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.35■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm6685D3YYP3 228 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm9857F7CXR1 130 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 GhrP16882 650 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Sept4P28661 478 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Impdh1P50096 514 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms