RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RUFY2Q8WXA3 655 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 RAB40AQ8WXH6 277 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 NCSTNQ92542 709 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 KCNJ9Q92806 393 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CUL5Q93034 780 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ATP2A3Q93084 1043 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 RIOK1Q9BRS2 568 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 NPLQ9BXD5 320 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TRIM31Q9BZY9 425 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SIL1Q9H173 461 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC25A18Q9H1K4 315 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 EPHX3Q9H6B9 360 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 C11orf49Q9H6J7 331 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TTC12Q9H892 705 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GPR108Q9NPR9 543 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 DIAPH3Q9NSV4 1193 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 NKIRAS2Q9NYR9 191 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MPP6Q9NZW5 540 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 DBNLQ9UJU6 430 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SARDHQ9UL12 918 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 LAMA4Q16363 1823 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SMCHD1A6NHR9 2005 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ZBED9Q6R2W3 1325 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 COL4A6Q14031 1691 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 A0A1W2PRG0 241 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 NPIPB15A6NHN6 443 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 C19orf81C9J6K1 198 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CLIC1O00299 241 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 DNM1LO00429 736 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 FRAT2O75474 233 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CNTN5O94779 1100 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MT-CO3P00414 261 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 URODP06132 367 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ENO1P06733 434 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CHRM4P08173 479 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ALDOCP09972 364 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM191BP0C7N4 346 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 RFPL3SP0C7P2 107 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ITGB8P26012 769 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 NDUFS1P28331 727 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MAPK4P31152 587 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ABCD1P33897 745 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SHMT1P34896 483 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 BSGP35613 385 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 RGS2P41220 211 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MTNR1AP48039 350 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HARS2P49590 506 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 RPS3AP61247 264 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 UFM1P61960 85 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 RPL7AP62424 266 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SHC2P98077 582 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 B4GALNT1Q00973 533 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 DMWDQ09019 674 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TDGQ13569 410 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CUL4AQ13619 759 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 BYSLQ13895 437 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MFSD13AQ14CX5 517 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC18A3Q16572 532 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 KRT71Q3SY84 523 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 KIAA1755Q5JYT7 1200 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 NAPEPLDQ6IQ20 393 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 FBXL22Q6P050 247 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 KLHL24Q6TFL4 600 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 GSG1LQ6UXU4 331 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MON1AQ86VX9 555 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM200AQ86VY9 491 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 BRSK2Q8IWQ3 736 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TEX11Q8IYF3 940 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 LSMEM1Q8N8F7 131 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TERB1Q8NA31 727 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 GPRC5AQ8NFJ5 357 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MAFAQ8NHW3 353 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 KCNG4Q8TDN1 519 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 WFIKKN2Q8TEU8 576 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CNOT9Q92600 299 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 LPAR1Q92633 364 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 KIF1BPQ96EK5 621 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SAAL1Q96ER3 474 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 WBP1Q96G27 269 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 P2RY11Q96G91 374 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HIC2Q96JB3 615 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 GPR78Q96P69 363 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HDHD5Q9BXW7 423 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ITPAQ9BY32 194 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 CIPCQ9C0C6 399 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 RANBP17Q9H2T7 1088 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TTYH1Q9H313 450 aaPredicted RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 MUC13Q9H3R2 512 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 SYNCQ9H7C4 482 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 BRF2Q9HAW0 419 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 PIH1D3Q9NQM4 214 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 EIF2B3Q9NR50 452 aaKnown RBP2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ANKEF1Q9NU02 776 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HAUS2Q9NVX0 235 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 ASIC5Q9NY37 505 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HDAC6Q9UBN7 1215 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 HEY2Q9UBP5 337 aa2.61□□□□□ -1.99
SMARCB1-208ENST00000634926 TBC1D29Q9UFV1 150 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms