RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SPESP1Q6UW49 350 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CXCL17Q6UXB2 119 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 DENND6AQ8IWF6 608 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 FSTL5Q8N475 847 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PEBP4Q96S96 227 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 FIZ1Q96SL8 496 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 FBXW11Q9UKB1 542 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TRIM43BA6NCK2 446 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 MT-CYBP00156 380 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 FGF1P05230 155 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 AMD1P17707 334 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 FSTL1Q12841 308 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ACAP2Q15057 778 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 INAQ16352 499 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 MAPKAPK3Q16644 382 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TTC23Q5W5X9 447 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 RAD21L1Q9H4I0 556 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 SATB2Q9UPW6 733 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ZBTB14O43829 449 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 NPHS1O60500 1241 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ANXA6P08133 673 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF24P17028 368 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CCNA2P20248 432 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ATP12AP54707 1039 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 RGS21Q2M5E4 152 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 DUSP28Q4G0W2 176 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TAC4Q86UU9 113 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 SELENOMQ8WWX9 145 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TRMOQ9BU70 441 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ADAM7Q9H2U9 754 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ASB8Q9H765 288 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 RAB23Q9ULC3 237 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PPM1HQ9ULR3 514 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 G3V2T6 193 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 KLF11O14901 512 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 KRT33AO76009 404 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 IFNA16P05015 189 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 IFNGR2P38484 337 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 NOVP48745 357 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CLCNKBP51801 687 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 POLR2LP62875 67 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CES5AQ6NT32 575 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 IRGQQ8WZA9 623 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TUBGCP5Q96RT8 1024 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 REXO4Q9GZR2 422 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 REEP1Q9H902 201 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 MFHAS1Q9Y4C4 1052 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CCDC189A1A4V9 331 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TBC1D3BA6NDS4 549 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CLK3P49761 638 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 POLR2JP52435 117 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 DSC2Q02487 901 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 STX4Q12846 297 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF605Q86T29 641 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PCED1BQ96HM7 432 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CORO1BQ9BR76 489 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 RNF208Q9H0X6 261 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PLCH1Q4KWH8 1693 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 MATN3O15232 486 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 LRIG2O94898 1065 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 HIST1H2ABP04908 130 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 TUFMP49411 452 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ALG11Q2TAA5 492 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 RAET1GQ6H3X3 334 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CCDC149Q6ZUS6 474 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 HIST3H2AQ7L7L0 130 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 COLGALT2Q8IYK4 626 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ELMO1Q92556 727 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 HIST1H2ACQ93077 130 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ATAD3AQ9NVI7 634 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MAGEL2Q9UJ55 1249 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 FAM149AA5PLN7 773 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 H3BMM5 538 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CCL22O00626 93 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ASNA1O43681 348 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 OTCP00480 354 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ANXA5P08758 320 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 CTPS1P17812 591 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ALOX12P18054 663 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SERPINA4P29622 427 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SLC1A2P43004 574 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 GSTM5P46439 218 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 LSM3P62310 102 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 ZBTB46Q86UZ6 589 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 HEATR4Q86WZ0 1026 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 SFRP1Q8N474 314 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 DQX1Q8TE96 717 aaKnown RBP8.32□□□□□ -1.08
ALMS1-208ENST00000620466 NELL1Q92832 810 aa8.32□□□□□ -1.08
ALMS1-208ENST00000620466 MKL2Q9ULH7 1088 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms