RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 ARMCX3Q9UH62 379 aaPredicted RBP3.51□□□□□ -1.85
SMC5-204ENST00000618375 TRPS1Q9UHF7 1281 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 CDH22Q9UJ99 828 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 RIMS3Q9UJD0 308 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 ZNF229Q9UJW7 825 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 FBXO10Q9UK96 956 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 PSME2Q9UL46 239 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 PACSIN2Q9UNF0 486 aaPredicted RBP3.51□□□□□ -1.85
SMC5-204ENST00000618375 COPS3Q9UNS2 423 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 ERVK-19Q9WJR5 959 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 KCNK7Q9Y2U2 307 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 MAP3K2Q9Y2U5 619 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 TMX2Q9Y320 296 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 MRPS23Q9Y3D9 190 aaKnown RBP3.51□□□□□ -1.85
SMC5-204ENST00000618375 HEMK1Q9Y5R4 338 aaPredicted RBP3.51□□□□□ -1.85
SMC5-204ENST00000618375 MAGED1Q9Y5V3 778 aaPredicted RBP3.51□□□□□ -1.85
SMC5-204ENST00000618375 SNX13Q9Y5W8 968 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 AP1M2Q9Y6Q5 423 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 DUSP10Q9Y6W6 482 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 PMF1-BGLAPU3KQ54 211 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 ATRNO75882 1429 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 SPEF2Q9C093 1822 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 LAMB1P07942 1786 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 ANKRD36CQ5JPF3 1778 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 CNTNAP1P78357 1384 aa3.51□□□□□ -1.85
SMC5-204ENST00000618375 ASTN2O75129 1339 aaPredicted RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 PTPRMP28827 1452 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 TAF1LQ8IZX4 1826 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 ATAD5Q96QE3 1844 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 TRAV20A0A0B4J274 112 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 A0A1B0GVM2 712 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 FAM92AA1XBS5 289 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 A6NCN8 305 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 TRIM75PA6NK02 468 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 H0Y626 953 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 UBXN8O00124 270 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 FCHO1O14526 889 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 KIAA0355O15063 1070 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 KIAA0391O15091 583 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 CALUO43852 315 aaPredicted RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 HS6ST1O60243 411 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 BRINP1O60477 761 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 NDUFS6O75380 124 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 UPK1BO75841 260 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 IDH1O75874 414 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 KLHL18O94889 574 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 MFN2O95140 757 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 HTR3BO95264 441 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 PTBP3O95758 552 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 BMP15O95972 392 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 PLGP00747 810 aaPredicted RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 GH1P01241 217 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 FGGP02679 453 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 S100A8P05109 93 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 KRT18P05783 430 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 PROS1P07225 676 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 C1QTNF9P0C862 333 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 PSKH1P11801 424 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 MYL4P12829 197 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 IL7P13232 177 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 GNSP15586 552 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 ZNF30P17039 623 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 IFNAR1P17181 557 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 CKMT2P17540 419 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 TFE3P19532 575 aaPredicted RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 AOC1P19801 751 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 DDCP20711 480 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 CYP2A7P20853 494 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 ZP3P21754 424 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 S100PP25815 95 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 GCAP28676 217 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 EEF1DP29692 281 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 CHRNA3P32297 505 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 EIF4A3P38919 411 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 EIF2DP41214 584 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 GSTM5P46439 218 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 RPS5P46782 204 aaKnown RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 PCP4P48539 62 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 SERPINB10P48595 397 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 SULT1E1P49888 294 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 SEPHS1P49903 392 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 PPP5CP53041 499 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 ERVFC1P60507 584 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 HAND2P61296 217 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 CNTN2Q02246 1040 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 CAV1Q03135 178 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 EGR3Q06889 387 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 DBPQ10586 325 aaPredicted RBP3.5□□□□□ -1.85
SMC5-204ENST00000618375 CDH17Q12864 832 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 SF3A3Q12874 501 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMC5-204ENST00000618375 ABRQ12979 859 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 MAPK7Q13164 816 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 KCNAB2Q13303 367 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 TNK1Q13470 666 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 KCNC3Q14003 757 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 PON2Q15165 354 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 MAPKAPK3Q16644 382 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 ZNF827Q17R98 1081 aa3.5□□□□□ -1.85
SMC5-204ENST00000618375 EIF2S3LQ2VIR3 472 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms