RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LCP1P13796 627 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 HOXD13P35453 343 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 PRPHP41219 470 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 TSFMP43897 325 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 VAV2P52735 878 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 NUCB2P80303 420 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 INCA1Q0VD86 236 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 LONRF1Q17RB8 773 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 EFHC1Q5JVL4 640 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 OGFOD2Q6N063 350 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 FAM180AQ6UWF9 173 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 MED25Q71SY5 747 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 SKAP1Q86WV1 359 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 PELI3Q8N2H9 469 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 DQX1Q8TE96 717 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 CNDP1Q96KN2 507 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 IPO9Q96P70 1041 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 SLC38A3Q99624 504 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 PRMT1Q99873 361 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 C1QTNF7Q9BXJ2 289 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 MUC3BQ9H195 1237 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 PDRG1Q9NUG6 133 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 TMEM63CQ9P1W3 806 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 TINAGQ9UJW2 476 aa6.82□□□□□ -1.32
SCAMP1-206ENST00000618166 TLN2Q9Y4G6 2542 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 CACNA1CQ13936 2221 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 NCOA6Q14686 2063 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 PRSS38A1L453 326 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TCAF2A6NFQ2 919 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 LRRIQ3A6PVS8 624 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 F5H5T6 163 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 EML2O95834 649 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 FYNP06241 537 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 FGF5P12034 268 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 IGFBP2P18065 325 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 AGAP20933 346 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 HOXC12P31275 282 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 NASPP49321 788 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 CYP2J2P51589 502 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 DGKQP52824 942 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 DAOAP59103 153 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 NFATC2Q13469 925 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 MYBPC3Q14896 1274 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 C3AR1Q16581 482 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TMCO4Q5TGY1 634 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 HMBOX1Q6NT76 420 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 PWWP2BQ6NUJ5 590 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 FBXL22Q6P050 247 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 MTFR2Q6P444 385 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TMEM207Q6UWW9 146 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 SPOCD1Q6ZMY3 1216 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 CBARPQ8N350 705 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 GALNT16Q8N428 558 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 ENDOVQ8N8Q3 282 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 SLC37A2Q8TED4 501 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TMEM158Q8WZ71 300 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 RAB7BQ96AH8 199 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 SGSM3Q96HU1 749 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TAAR6Q96RI8 345 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 ZNF559Q9BR84 538 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 UBXN6Q9BZV1 441 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 TM6SF2Q9BZW4 377 aa6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 FOXP1Q9H334 677 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 CARS2Q9HA77 564 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 APOBEC3GQ9HC16 384 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-206ENST00000618166 A0A0D9SEW6 157 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 RASA4BC9J798 803 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 SMAD7O15105 426 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 RASA4O43374 803 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 KIF1CO43896 1103 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 CRLF1O75462 422 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 MT-ND3P03897 115 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 ALPPP05187 535 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 UGT2B4P06133 528 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 DNASE1P24855 282 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 SMSP52788 366 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 KIAA1024LP59773 190 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 PITX1P78337 314 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 ZNF169Q14929 603 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 GOLGA7BQ2TAP0 167 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 ZNF805Q5CZA5 627 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 CARD16Q5EG05 197 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 C16orf47Q6ZP98 133 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 TTC7BQ86TV6 843 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 TAC4Q86UU9 113 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 BCORP1Q8N888 145 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 DNAJB14Q8TBM8 379 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 LARP4BQ92615 738 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 DNAJC19Q96DA6 116 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 KLHL32Q96NJ5 620 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 TSPAN10Q9H1Z9 355 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 CHST8Q9H2A9 424 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 LRRC4Q9HBW1 653 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 NOL7Q9UMY1 257 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms