RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 CLCN3P51790 818 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 MRPL28Q13084 256 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ATF7IP2Q5U623 682 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 AGAP7PQ5VUJ5 663 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SULT1C3Q6IMI6 304 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 RETREG3Q86VR2 466 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 KCTD15Q96SI1 283 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TBCBQ99426 244 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 HCRTO43612 131 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 AIREO43918 545 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 C8BP07358 591 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 CD40LGP29965 261 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 NPY2RP49146 381 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TRAP1Q12931 704 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SNX17Q15036 470 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 HSDL1Q3SXM5 330 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 NOL9Q5SY16 702 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 DEFB106AQ8N104 65 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 EFHD2Q96C19 240 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 VAT1Q99536 393 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 MKS1Q9NXB0 559 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SLAMF8Q9P0V8 285 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 DCCP43146 1447 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GCATO75600 419 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 HLA-DPA1P20036 260 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 CCT3P49368 545 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 RPS3AP61247 264 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 DAG1Q14118 895 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GRB7Q14451 532 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 C6orf141Q5SZD1 244 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GCNT7Q6ZNI0 430 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 PSTKQ8IV42 348 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 CEP97Q8IW35 865 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TCAIMQ8N3R3 496 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ZSCAN5AQ9BUG6 496 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SNX6Q9UNH7 406 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SNX10Q9Y5X0 201 aa13.97□□□□□ -0.17
TNFRSF11A-205ENST00000616710 BCORQ6W2J9 1755 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 PMM2O15305 246 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 RASAL1O95294 804 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 POLR2EP19388 210 aaKnown RBP13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GABRB3P28472 473 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 CD47Q08722 323 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 AMER2Q8N7J2 671 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 FRS2Q8WU20 508 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ZBTB18Q99592 522 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ADAMTS10Q9H324 1103 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 DSN1Q9H410 356 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 THG1LQ9NWX6 298 aaKnown RBP13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ATG7O95352 703 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 VDRP11473 427 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 MSH3P20585 1137 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 KCNA5P22460 613 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 WEE1P30291 646 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 MXD1Q05195 221 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GPR162Q16538 588 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TPRG1LQ5T0D9 272 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 STEAP3Q658P3 488 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 SLC38A6Q8IZM9 456 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 EID3Q8N140 333 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 PPHLN1Q8NEY8 458 aaKnown RBP13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 KCNN1Q92952 543 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 LGALS12Q96DT0 336 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 PAK1IP1Q9NWT1 392 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 ARHGAP28Q9P2N2 729 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 FAM50BQ9Y247 325 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 GMPPBQ9Y5P6 360 aa13.96□□□□□ -0.17
TNFRSF11A-205ENST00000616710 TCRBV3S1A0A5B6 114 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF701M0R085 212 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 IPO13O94829 963 aaKnown RBP13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CCT8P50990 548 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 HNRNPFP52597 415 aaKnown RBP13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NIPAL4Q0D2K0 466 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 LRIT3Q3SXY7 679 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RBM20Q5T481 1227 aaKnown RBP13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PXDC1Q5TGL8 231 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NAPEPLDQ6IQ20 393 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TLK2Q86UE8 772 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CCDC28AQ8IWP9 274 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 TOP1MTQ969P6 601 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RHOJQ9H4E5 214 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZBTB20Q9HC78 741 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ABCB9Q9NP78 766 aa13.96□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 BCKDKO14874 412 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 JRKO75564 520 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 PAMP19021 973 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 RFC2P35250 354 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 NUDT6P53370 316 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 CACNB2Q08289 660 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF11A-205ENST00000616710 ZNF267Q14586 743 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms