RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	ASB14	A6NK59	587 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	C16orf96	A6NNT2	1141 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	SYNCRIP	O60506	623 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TULP3	O75386	442 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HLA-DQB2	P05538	268 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CDH1	P12830	882 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HGF	P14210	728 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	AKAP5	P24588	427 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ELK4	P28324	431 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HTR7	P34969	479 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ARSF	P54793	590 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MLLT10	P55197	1068 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	LILRA4	P59901	499 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	DAG1	Q14118	895 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GEN1	Q17RS7	908 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MARCH8	Q5T0T0	291 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TIGD7	Q6NT04	549 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TFAP2D	Q7Z6R9	452 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	SCAI	Q8N9R8	606 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	BPIFB6	Q8NFQ5	453 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	ABHD11	Q8NFV4	315 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HDAC2	Q92769	488 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	TUBGCP3	Q96CW5	907 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	SLX1A	Q9BQ83	275 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	PSD2	Q9BQI7	771 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	C16orf70	Q9BSU1	422 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	CHID1	Q9BWS9	393 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HMG20A	Q9NP66	347 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	HPS4	Q9NQG7	708 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	DAPK2	Q9UIK4	370 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	DSE	Q9UL01	958 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	GPR45	Q9Y5Y3	372 aa		13.7	□□□□□ -0.22
UBE2F-223	ENST00000612130	MCM3AP	O60318	1980 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	KRBA1	A5PL33	1030 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	GABRD	O14764	452 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	SLC7A4	O43246	635 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PRSS23	O95084	383 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	ALOX5	P09917	674 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	USP17L7	P0C7H9	530 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	THRB	P10828	461 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	HOXB8	P17481	243 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CRHBP	P24387	322 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	SHMT2	P34897	504 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	KCNC1	P48547	511 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	EIF2B2	P49770	351 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	MAPK10	P53779	464 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CDKN2D	P55273	166 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	YBX1	P67809	324 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	OCA2	Q04671	838 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	SOX4	Q06945	474 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	VGLL4	Q14135	290 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	BCL2A1	Q16548	175 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	RABL3	Q5HYI8	236 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	FAM219B	Q5XKK7	198 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TAF2	Q6P1X5	1199 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMEM207	Q6UWW9	146 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	BHLHA9	Q7RTU4	235 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	GPRIN1	Q7Z2K8	1008 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	THAP5	Q7Z6K1	395 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	IFNE	Q86WN2	208 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	RIMKLA	Q8IXN7	391 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PARP8	Q8N3A8	854 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMCO5A	Q8N6Q1	288 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PTER	Q96BW5	349 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	ALPK1	Q96QP1	1244 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	SMO	Q99835	787 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TUT1	Q9H6E5	874 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	RNF19A	Q9NV58	838 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	GIMAP2	Q9UG22	337 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	MAGEL2	Q9UJ55	1249 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	LEF1	Q9UJU2	399 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PTGDR2	Q9Y5Y4	395 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	DICER1	Q9UPY3	1922 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130		C9JVG2	144 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	FGF10	O15520	208 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	DEAF1	O75398	565 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	NPPA	P01160	153 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CD1D	P15813	335 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	NCK1	P16333	377 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	EEF1D	P29692	281 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	HOXC13	P31276	330 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	IDUA	P35475	653 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	OPRL1	P41146	370 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	IREB2	P48200	963 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	PLA2G16	P53816	162 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CDH13	P55290	713 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CDC42EP1	Q00587	391 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	EPS8	Q12929	822 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TBPL2	Q6SJ96	375 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TAC4	Q86UU9	113 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	DNAJB14	Q8TBM8	379 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	EMID1	Q96A84	441 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	BIRC7	Q96CA5	298 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	CSF3R	Q99062	836 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	MFSD1	Q9H3U5	465 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms