RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MN1Q10571 1320 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 APCP25054 2843 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 NDUFA10O95299 355 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CPP00450 1065 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ANKRD34CP0C6C1 535 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 MMP8P22894 467 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RFC1P35251 1148 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 GARSP41250 739 aaKnown RBP11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 GPR1P46091 355 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 MTIF2P46199 727 aaKnown RBP11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 EPHA4P54764 986 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 GFERP55789 205 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 AP1S1P61966 158 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SH3BP2P78314 561 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 LYSMD3Q7Z3D4 306 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RASGRP3Q8IV61 690 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CT55Q8WUE5 264 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLC20A1Q8WUM9 679 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLC25A23Q9BV35 468 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 MFRPQ9BY79 579 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ACTL8Q9H568 366 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SP110Q9HB58 689 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 KCTD5Q9NXV2 234 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PCDHGA6Q9Y5G7 932 aa11.68□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 NPIPB15A6NHN6 443 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SOD1P00441 154 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 KRT3P12035 628 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TNFAIP3P21580 790 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 GPD1P21695 349 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SEPHS1P49903 392 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 NDST2P52849 883 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TPI1P60174 286 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PTPRRQ15256 657 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ADAMTSL4Q6UY14 1074 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ARHGAP36Q6ZRI8 547 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PLXDC1Q8IUK5 500 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CBARPQ8N350 705 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLC30A5Q8TAD4 765 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SH3KBP1Q96B97 665 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 OR6C1Q96RD1 312 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TBC1D10AQ9BXI6 508 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLC39A8Q9C0K1 460 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TBC1D29Q9UFV1 150 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CD84Q9UIB8 345 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PRKAB1Q9Y478 270 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PCDHGA9Q9Y5G4 932 aaKnown RBP11.67□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PDZD2O15018 2839 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 F8P00451 2351 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 A0A0U1RQS6 177 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ARHGAP42A6NI28 874 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ARGFXA6NJG6 315 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 F8VZ95 297 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PSMD11O00231 422 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CCP110O43303 1012 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SNX2O60749 519 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 LRCH4O75427 683 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RECKO95980 971 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CCL11P51671 97 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 DPTQ07507 201 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 IL11RAQ14626 422 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 DPY19L2P1Q6NXN4 242 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 JMJD6Q6NYC1 403 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 IYDQ6PHW0 289 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RFLNAQ6ZTI6 216 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLC9B2Q86UD5 537 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TSPAN33Q86UF1 283 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 Q8NA96 180 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SCAMP4Q969E2 229 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 C9orf72Q96LT7 481 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 TGM7Q96PF1 710 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PSKH2Q96QS6 385 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RUFY1Q96T51 708 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 EPB41L1Q9H4G0 881 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 MLXIPLQ9NP71 852 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 SLAMF7Q9NQ25 335 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ACSS2Q9NR19 701 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PADI1Q9ULC6 663 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 FZD10Q9ULW2 581 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 KCNK6Q9Y257 313 aa11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1P1-201ENST00000604187 CHD5Q8TDI0 1954 aa11.65□□□□□ -0.54
PDLIM1P1-201ENST00000604187 ADGRG4Q8IZF6 3080 aa11.65□□□□□ -0.54
PDLIM1P1-201ENST00000604187 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1P1-201ENST00000604187 C21orf140B9A014 251 aa11.65□□□□□ -0.54
PDLIM1P1-201ENST00000604187 DFFAO00273 331 aa11.65□□□□□ -0.54
PDLIM1P1-201ENST00000604187 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms