RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 SREK1Q8WXA9 508 aaKnown RBP22.25■■□□□ 1.15
PPFIA3-212ENST00000602897 OSBPL1AQ9BXW6 950 aa22.25■■□□□ 1.15
PPFIA3-212ENST00000602897 OSBPL6Q9BZF3 934 aa22.25■■□□□ 1.15
PPFIA3-212ENST00000602897 EBF3Q9H4W6 596 aa22.25■■□□□ 1.15
PPFIA3-212ENST00000602897 NMRAL1Q9HBL8 299 aa22.25■■□□□ 1.15
PPFIA3-212ENST00000602897 KLHL2O95198 593 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 TGDSO95455 350 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 F7P08709 466 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CPA3P15088 417 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CTPS1P17812 591 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 TARSP26639 723 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 HNF1BP35680 557 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 ZNF789Q5FWF6 425 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 BRAT1Q6PJG6 821 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 GDPD4Q6W3E5 623 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 USP45Q70EL2 814 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 LYSMD3Q7Z3D4 306 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 FAM3CQ92520 227 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 MCCC1Q96RQ3 725 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 TSSK1BQ9BXA7 367 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 ELOVL2Q9NXB9 296 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 DLGAP2Q9P1A6 1054 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 FKBPLQ9UIM3 349 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 APPL1Q9UKG1 709 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 NDRG2Q9UN36 371 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 KIF26AQ9ULI4 1882 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 F5P12259 2224 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 H0Y858 1186 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 SAT1P21673 171 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 BGNP21810 368 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 GRK2P25098 689 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 GKP32189 559 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 MC4RP32245 332 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 PPARGP37231 505 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 SOX9P48436 509 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 PRKAA2P54646 552 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 NHLH1Q02575 133 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CACNG1Q06432 222 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 GAB4Q2WGN9 574 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 PREPLQ4J6C6 727 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 C16orf46Q6P387 395 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 FOXR1Q6PIV2 292 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CERS6Q6ZMG9 384 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 FAM47EQ6ZV65 393 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 Q6ZVU0 165 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CEP97Q8IW35 865 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 PLD6Q8N2A8 252 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 CIPCQ9C0C6 399 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 ZDHHC6Q9H6R6 413 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 C8orf33Q9H7E9 229 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 COPG2Q9UBF2 871 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 PLA2G4CQ9UP65 541 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 ARL2BPQ9Y2Y0 163 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 COMMD10Q9Y6G5 202 aa22.24■■□□□ 1.15
PPFIA3-212ENST00000602897 TRIM24O15164 1050 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 PHGDHO43175 533 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 NDUFS3O75489 264 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 ALPIP09923 528 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 CD9P21926 228 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 ITPRIPL2Q3MIP1 535 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 C6orf89Q6UWU4 347 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 TBC1D1Q86TI0 1168 aaPredicted RBP22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 STK40Q8N2I9 435 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 ZNF398Q8TD17 642 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 C7orf26Q96N11 449 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 SMIM14Q96QK8 99 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 TTC1Q99614 292 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 HPS4Q9NQG7 708 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 RUVBL2Q9Y230 463 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 SLC30A1Q9Y6M5 507 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 CACNA1HO95180 2353 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 TICRRQ7Z2Z1 1910 aa22.23■■□□□ 1.15
PPFIA3-212ENST00000602897 C1orf232A0A0U1RR37 186 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 TSPAN11A1L157 253 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 H2AFYO75367 372 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 TOP3BO95985 862 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 TROVE2P10155 538 aaKnown RBP eCLIP22.22■■□□□ 1.158e-7■■□□□ 12.8
PPFIA3-212ENST00000602897 EIF2DP41214 584 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 SUOXP51687 545 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 ADARP55265 1226 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 XIAPP98170 497 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 IRF9Q00978 393 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 PEX6Q13608 980 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 RUNX3Q13761 415 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 SEMA3AQ14563 771 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 CHI3L2Q15782 390 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 PTPRNQ16849 979 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 FAM83EQ2M2I3 478 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 RBM20Q5T481 1227 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 LYPLAL1Q5VWZ2 237 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 ZDHHC20Q5W0Z9 365 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 OTOAQ7RTW8 1153 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 C12orf40Q86WS4 652 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 LPGAT1Q92604 370 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 MSANTD3Q96H12 275 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 IRF2BPLQ9H1B7 796 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 SLCO1B3Q9NPD5 702 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 KLHL14Q9P2G3 628 aa22.22■■□□□ 1.15
PPFIA3-212ENST00000602897 ATXN2Q99700 1313 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms