RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MLXQ9UH92 298 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CSH1P0DML2 217 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CSH2P0DML3 217 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CRHR1P34998 444 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ADAM17P78536 824 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ITPK1Q13572 414 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MSL3Q8N5Y2 521 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CPSF7Q8N684 471 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CXorf40BQ96DE9 158 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 H0Y858 1186 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SLC30A4O14863 429 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CLUP10909 449 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MAGEA2P43356 314 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 OAZ1P54368 228 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF613Q6PF04 617 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 DENND1CQ8IV53 801 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 RBFAQ8N0V3 343 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 OR4L1Q8NH43 312 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GPER1Q99527 375 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MRPL45Q9BRJ2 306 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ZYG11BQ9C0D3 744 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CABIN1Q9Y6J0 2220 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 EML1O00423 815 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 TPD52L2O43399 206 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PPM1LQ5SGD2 360 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SUN5Q8TC36 379 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 NMUR2Q9GZQ4 415 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 STARD7Q9NQZ5 370 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 KCNE2Q9Y6J6 123 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 URADA6NGE7 173 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 XKRYO14609 159 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SLC9A3R1O14745 358 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MPSTP25325 297 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SNAPC1Q16533 368 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 LRRC55Q6ZSA7 311 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF615Q8N8J6 731 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 IPCEF1Q8WWN9 437 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CLPTM1LQ96KA5 538 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MCMBPQ9BTE3 642 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PNPOQ9NVS9 261 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 C2orf71A6NGG8 1288 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 TISP43B9A030 160 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ARF4P18085 180 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 TGFB2P61812 414 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 DLG2Q15700 870 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 UNC93AQ86WB7 457 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SLC4A11Q8NBS3 891 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 HDAC10Q969S8 669 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CIB1Q99828 191 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ACP6Q9NPH0 428 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PTPRUQ92729 1446 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CCNHP51946 323 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PSMD5Q16401 504 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 LPCAT4Q643R3 524 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 LRRC20Q8TCA0 184 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 RFKQ969G6 155 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PCDHGB3Q9Y5G1 929 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 NRXN1Q9ULB1 1477 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 A0A0U1RQJ8 604 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TRAFD1O14545 582 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TM7SF2O76062 418 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TRMOQ9BU70 441 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 NKIRAS2Q9NYR9 191 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 IFT80Q9P2H3 777 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 AKAP6Q13023 2319 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 DNAJA2O60884 412 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 PSEN1P49768 467 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 RTL4Q6ZR62 310 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CSGALNACT1Q8TDX6 532 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 COPS4Q9BT78 406 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 DNAJC28Q9NX36 388 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GULP1Q9UBP9 304 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ERCC6L2Q5T890 1561 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 RALGPS2Q86X27 583 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CBR4Q8N4T8 237 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 GRPEL2Q8TAA5 225 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 HELQQ8TDG4 1101 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 FATE1Q969F0 183 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CST11Q9H112 138 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ASTN1O14525 1302 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF12P17014 697 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 E2F2Q14209 437 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 FAM35AQ86V20 835 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 HJURPQ8NCD3 748 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 BLOC1S4Q9NUP1 217 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 TBC1D3BA6NDS4 549 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 LDOC1O95751 146 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 ITIH1P19827 911 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 RPL7AP62424 266 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 BTN3A2P78410 334 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SEMA5AQ13591 1074 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 CHST15Q7LFX5 561 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 SPATA19Q7Z5L4 167 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
CSMD1-217ENST00000602723 RNF157Q96PX1 679 aa9.57□□□□□ -0.88
CSMD1-217ENST00000602723 KCNN2Q9H2S1 579 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms