RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PDHA1P08559 390 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 PRKAR1AP10644 381 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 ZNF28P17035 718 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 NR1D1P20393 614 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 MIPP30301 263 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 STAT5AP42229 794 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 RENBPP51606 427 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 MLLT10P55197 1068 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 MAP7Q14244 749 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 SYCP1Q15431 976 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 C4orf17Q53FE4 359 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 TMCO4Q5TGY1 634 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 TCTN3Q6NUS6 607 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 DNAJC24Q6P3W2 148 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 CEACAM20Q6UY09 585 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 APTXQ7Z2E3 356 aaKnown RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 TRIM74Q86UV6 250 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 FAM129CQ86XR2 697 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 NRSN1Q8IZ57 195 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 LZTR1Q8N653 840 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 TEX26Q8N6G2 289 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 EFCAB3Q8N7B9 438 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 CCDC112Q8NEF3 446 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 FNIP1Q8TF40 1166 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 OR2M4Q96R27 311 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 MGME1Q9BQP7 344 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 ZPBPQ9BS86 351 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 GPN2Q9H9Y4 310 aaPredicted RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 SARS2Q9NP81 518 aaKnown RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 OGFRQ9NZT2 677 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 TBC1D29Q9UFV1 150 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 PCSK1NQ9UHG2 260 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 TP53TG5Q9Y2B4 290 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 MRPS18BQ9Y676 258 aaKnown RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 OAS3Q9Y6K5 1087 aaKnown RBP6.07□□□□□ -1.44
VRK3-220ENST00000600259 ANKRD36A6QL64 1941 aa6.07□□□□□ -1.44
VRK3-220ENST00000600259 CELSR2Q9HCU4 2923 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 LRBAP50851 2863 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 GOLGA6L3A6NEY3 463 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 DFFAO00273 331 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 LRCH4O75427 683 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 RECKO95980 971 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 CPP00450 1065 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 C9P02748 559 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 PDGFAP04085 211 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 CYP2A6P11509 494 aaPredicted RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 TCF4P15884 667 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 CTPS1P17812 591 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 TCN2P20062 427 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 AMPD1P23109 780 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 IL4RP24394 825 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 IL1R2P27930 398 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 HSPA9P38646 679 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 GPR1P46091 355 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 STC1P52823 247 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 MAXP61244 160 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 HHEXQ03014 270 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 KLRB1Q12918 225 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 PEX6Q13608 980 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 LACTB2Q53H82 288 aaPredicted RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 RALGPS1Q5JS13 557 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 SNAP47Q5SQN1 464 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 DENND2CQ68D51 928 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 TXNRD3NBQ6F5E7 133 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 RAET1GQ6H3X3 334 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 DCUN1D2Q6PH85 259 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 DOK6Q6PKX4 331 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 MARK2Q7KZI7 788 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 ZNF765Q7L2R6 523 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 POLNQ7Z5Q5 900 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 PSTKQ8IV42 348 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 OR10G6Q8NH81 332 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 STARD8Q92502 1023 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 NCSTNQ92542 709 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 ERGIC2Q96RQ1 377 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 EFHD1Q9BUP0 239 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 RIOK2Q9BVS4 552 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 HSD3B7Q9H2F3 369 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 TRIT1Q9H3H1 467 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 SP110Q9HB58 689 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 LIMA1Q9UHB6 759 aaKnown RBP6.06□□□□□ -1.44
VRK3-220ENST00000600259 CD84Q9UIB8 345 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 PRKAB1Q9Y478 270 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 ADGRG1Q9Y653 693 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 SLC30A1Q9Y6M5 507 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 RPS6KL1Q9Y6S9 549 aa6.06□□□□□ -1.44
VRK3-220ENST00000600259 MN1Q10571 1320 aaPredicted RBP6.05□□□□□ -1.44
VRK3-220ENST00000600259 TEP1Q99973 2627 aaKnown RBP6.05□□□□□ -1.44
VRK3-220ENST00000600259 A0A0J9YYE9 177 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 FADS2P1A8MWK0 482 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 POLR1CO15160 346 aaPredicted RBP6.05□□□□□ -1.44
VRK3-220ENST00000600259 DAPK3O43293 454 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 TRBC1P01850 177 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 ATP1A1P05023 1023 aaKnown RBP6.05□□□□□ -1.44
VRK3-220ENST00000600259 KRT7P08729 469 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 ANKRD34CP0C6C1 535 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 RNF224P0DH78 156 aa6.05□□□□□ -1.44
VRK3-220ENST00000600259 ATP1A3P13637 1013 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms