RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	OLIG2	Q13516	323 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DENND1A	Q8TEH3	1009 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GATA6	Q92908	595 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	IGSF21	Q96ID5	467 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SPATA13	Q96N96	652 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	USB1	Q9BQ65	265 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GRIP2	Q9C0E4	1043 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MTMR10	Q9NXD2	777 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PRKAG3	Q9UGI9	489 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MRPS23	Q9Y3D9	190 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SCN10A	Q9Y5Y9	1956 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	BDP1	A6H8Y1	2624 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335		K7EPI3	171 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TM9SF1	O15321	606 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DAB1	O75553	588 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	LTF	P02788	710 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NTHL1	P78549	312 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ZNF124	Q15973	351 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KIAA0319	Q5VV43	1072 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NIPAL1	Q6NVV3	410 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	BBS7	Q8IWZ6	715 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DCP1B	Q8IZD4	617 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CENPS	Q8N2Z9	138 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	APOPT1	Q96IL0	206 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	EBNA1BP2	Q99848	306 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CTRC	Q99895	268 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DAPK2	Q9UIK4	370 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	POU2F3	Q9UKI9	436 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CBY1	Q9Y3M2	126 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	STARD13	Q9Y3M8	1113 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CAPN14	A8MX76	684 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KLHL2	O95198	593 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PSMG1	O95456	288 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CSH1	P0DML2	217 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CSH2	P0DML3	217 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	STMN1	P16949	149 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PSMA3	P25788	255 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ENTPD1	P49961	510 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ELAVL2	Q12926	359 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TGFBI	Q15582	683 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	WASHC2D	Q5SRD0	308 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GPRIN1	Q7Z2K8	1008 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MTDH	Q86UE4	582 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TBC1D19	Q8N5T2	526 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	BANP	Q8N9N5	519 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RILP	Q96NA2	401 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SECISBP2	Q96T21	854 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NELL2	Q99435	816 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	LRMDA	Q9H2I8	198 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PRKAB1	Q9Y478	270 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TTC3	P53804	2025 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SDR42E2	A6NKP2	422 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM72C	H0Y354	149 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DFFA	O00273	331 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	C8A	P07357	584 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	M6PR	P20645	277 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ADRA1B	P35368	520 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RPL5	P46777	297 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GPR15	P49685	360 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	P2RX3	P56373	397 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GALNT1	Q10472	559 aa	Predicted RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GPNMB	Q14956	572 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM72A	Q5TYM5	149 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PRPF38B	Q5VTL8	546 aa	Known RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SULT1C3	Q6IMI6	304 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM72D	Q6L9T8	149 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	BEND4	Q6ZU67	534 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KDELC2	Q7Z4H8	507 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM72B	Q86X60	149 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MYLPF	Q96A32	169 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ARL5B	Q96KC2	179 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TKTL2	Q9H0I9	626 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GHITM	Q9H3K2	345 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SDHAF3	Q9NRP4	125 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SACM1L	Q9NTJ5	587 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NDE1	Q9NXR1	346 aa		11.31	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GVINP1	Q7Z2Y8	2422 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	C2orf71	A6NGG8	1288 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KPNA4	O00629	521 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MTSS1	O43312	755 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RNASEH1	O60930	286 aa	Known RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GCAT	O75600	419 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	F7	P08709	466 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MTHFD1	P11586	935 aa	Known RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	EPCAM	P16422	314 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FDFT1	P37268	417 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ALDH18A1	P54886	795 aa	Known RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SST	P61278	116 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	POU6F2	P78424	691 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ITGAD	Q13349	1161 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CHI3L2	Q15782	390 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PAQR9	Q6ZVX9	377 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RAPH1	Q70E73	1250 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MILR1	Q7Z6M3	343 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TEX47	Q8TBZ9	253 aa		11.3	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SMO	Q99835	787 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms