RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 RAVER1Q8IY67 606 aaKnown RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 NDUFAF2Q8N183 169 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 ZNF567Q8N184 647 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 GPR26Q8NDV2 337 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 FAM46DQ8NEK8 389 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 PATE1Q8WXA2 126 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 NAT6Q93015 286 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 CRELD1Q96HD1 420 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 DEPDC7Q96QD5 511 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 BAG1Q99933 345 aaPredicted RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 SUDS3Q9H7L9 328 aaPredicted RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 ASCL3Q9NQ33 180 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TRNAU1APQ9NX07 287 aaKnown RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 GOLGA6AQ9NYA3 693 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 UBP1Q9NZI7 540 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TAAR2Q9P1P5 351 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TMPRSS11EQ9UL52 423 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 DOLKQ9UPQ8 538 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 RNF215Q9Y6U7 377 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 LOC285095A0A1B0GVY8 99 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 B4DGG1 531 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 F5H423 210 aaPredicted RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 USP12O75317 370 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 PMPCBO75439 489 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 TCEA3O75764 348 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 DXOO77932 396 aaKnown RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 EML2O95834 649 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 ATP1A1P05023 1023 aaKnown RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 CA4P22748 312 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 PTPN7P35236 360 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 CHRNA4P43681 627 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 CCL7P80098 99 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 CTBSQ01459 385 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 CDK18Q07002 472 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 COL28A1Q2UY09 1125 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 C14orf28Q4W4Y0 310 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 PYCR3Q53H96 274 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 NAGSQ8N159 534 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 P3H4Q92791 437 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 GLMNQ92990 594 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 HIC2Q96JB3 615 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 MRGPRX2Q96LB1 330 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 ABCG4Q9H172 646 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 MAGEE1Q9HCI5 957 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 EVA1BQ9NVM1 165 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 NFKBIL1Q9UBC1 381 aaPredicted RBP12.07□□□□□ -0.48
LIG1-217ENST00000599165 APPL1Q9UKG1 709 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 DNPEPQ9ULA0 475 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 ZNF711Q9Y462 761 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 AK5Q9Y6K8 562 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
LIG1-217ENST00000599165 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 D6RAR5 112 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 APOC4-APOC2K7ER74 178 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 DDX3YO15523 660 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 NDST3O95803 873 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 APOC2P02655 101 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 RPLP0P05388 317 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 PYGMP11217 842 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 ITPKBP27987 946 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 RBL1P28749 1068 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 CA5AP35218 305 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 EIF2S3P41091 472 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 LSSP48449 732 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 WNT3AP56704 352 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 GABREP78334 506 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 B4GALNT1Q00973 533 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 OTUD4Q01804 1114 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 NR1D2Q14995 579 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 TBC1D25Q3MII6 688 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 ZNF648Q5T619 568 aaPredicted RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 RBM44Q6ZP01 1051 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 SPRED1Q7Z699 444 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 CCDC50Q8IVM0 306 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 TTC30BQ8N4P2 665 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 SPC24Q8NBT2 197 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 HTR3CQ8WXA8 447 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 OR2M4Q96R27 311 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 FCRL5Q96RD9 977 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 FAM118BQ9BPY3 351 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 ADGRE3Q9BY15 652 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 DPEP2Q9H4A9 486 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 FAM83DQ9H4H8 585 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 ZFYVE1Q9HBF4 777 aa12.06□□□□□ -0.48
LIG1-217ENST00000599165 LUC7LQ9NQ29 371 aaKnown RBP12.06□□□□□ -0.48
LIG1-217ENST00000599165 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms