RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 HAUS1Q96CS2 278 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 NXPE2Q96DL1 559 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 DEPDC7Q96QD5 511 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 DESI2Q9BSY9 194 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 ABCG4Q9H172 646 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 CARS2Q9HA77 564 aaKnown RBP12.98□□□□□ -0.33
USE1-207ENST00000596136 VPS18Q9P253 973 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 GULP1Q9UBP9 304 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 APPL1Q9UKG1 709 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 AMFRQ9UKV5 643 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 ST14Q9Y5Y6 855 aa12.98□□□□□ -0.33
USE1-207ENST00000596136 ZFC3H1O60293 1989 aaKnown RBP12.98□□□□□ -0.33
USE1-207ENST00000596136 ZFHX4Q86UP3 3567 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
USE1-207ENST00000596136 PMPCBO75439 489 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 KRT37O76014 449 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 RBL1P28749 1068 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 ADCY8P40145 1251 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 CETN2P41208 172 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 POLD2P49005 469 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 WNT3AP56704 352 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 GSDMDP57764 484 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
USE1-207ENST00000596136 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
USE1-207ENST00000596136 PCSK7Q16549 785 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 PYCR3Q53H96 274 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 CERCAMQ5T4B2 595 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 PEX26Q7Z412 305 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 FAM46DQ8NEK8 389 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 OXNAD1Q96HP4 312 aaPredicted RBP12.97□□□□□ -0.33
USE1-207ENST00000596136 HES6Q96HZ4 224 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 MRGPRX2Q96LB1 330 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 CCDC3Q9BQI4 270 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 RAD18Q9NS91 495 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 SPATS2LQ9NUQ6 558 aaKnown RBP12.97□□□□□ -0.33
USE1-207ENST00000596136 SIRPGQ9P1W8 387 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 KLHL8Q9P2G9 620 aaPredicted RBP12.97□□□□□ -0.33
USE1-207ENST00000596136 TRIM10Q9UDY6 481 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 RABGEF1Q9UJ41 708 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 ZNF711Q9Y462 761 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
USE1-207ENST00000596136 MACROD2A1Z1Q3 448 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GOLGA6CA6NDK9 693 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GOLGA6BA6NDN3 693 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 FADS2P1A8MWK0 482 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 DNAJC6O75061 913 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 ZNF189O75820 626 aaPredicted RBP12.96□□□□□ -0.33
USE1-207ENST00000596136 TJP3O95049 919 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 FGF1P05230 155 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GOLGA6DP0CG33 693 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GLB1P16278 677 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GNPDA1P46926 289 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 CTBSQ01459 385 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 ILF3Q12906 894 aaKnown RBP eCLIP12.96□□□□□ -0.33
USE1-207ENST00000596136 MPP3Q13368 585 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 TCEA2Q15560 299 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 C14orf28Q4W4Y0 310 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 PDPK2PQ6A1A2 396 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 CCDC70Q6NSX1 233 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 UBL4BQ8N7F7 174 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GPR26Q8NDV2 337 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 DTX3LQ8TDB6 740 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 ZSCAN5AQ9BUG6 496 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 TRABDQ9H4I3 376 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 GOLGA6AQ9NYA3 693 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 UBP1Q9NZI7 540 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 TMEM98Q9Y2Y6 226 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.33
USE1-207ENST00000596136 OAS3Q9Y6K5 1087 aaKnown RBP12.96□□□□□ -0.33
USE1-207ENST00000596136 SCN8AQ9UQD0 1980 aa12.96□□□□□ -0.34
USE1-207ENST00000596136 KIF26BQ2KJY2 2108 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 H7C0C1 242 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 INPP4BO15327 924 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 NUDT21O43809 227 aaKnown RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 CSO75390 466 aaKnown RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 PIRTP0C851 137 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 RBP3P10745 1247 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 BPIP17213 487 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 HLA-DPA1P20036 260 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 AK4P27144 223 aaPredicted RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 HMGCLP35914 325 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 ATP5OP48047 213 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
USE1-207ENST00000596136 PEX6Q13608 980 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 LRP8Q14114 963 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 NR1D2Q14995 579 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 SLC1A5Q15758 541 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 SIRPB2Q5JXA9 342 aa12.95□□□□□ -0.34
USE1-207ENST00000596136 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms