RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SLC4A1P02730 911 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 BPIP17213 487 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 NOVA1P51513 510 aaKnown RBP25.62■■□□□ 1.69
TRIM28-204ENST00000594806 ALG11Q2TAA5 492 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 ZNF542PQ5EBM4 170 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 SLC25A45Q8N413 288 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 GLIS1Q8NBF1 620 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 ZNF548Q8NEK5 533 aaPredicted RBP25.62■■□□□ 1.69
TRIM28-204ENST00000594806 BAHD1Q8TBE0 780 aaPredicted RBP25.62■■□□□ 1.69
TRIM28-204ENST00000594806 COX14Q96I36 57 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 DUSP23Q9BVJ7 150 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 SPATA16Q9BXB7 569 aa25.62■■□□□ 1.69
TRIM28-204ENST00000594806 FRMD8Q9BZ67 464 aaPredicted RBP25.62■■□□□ 1.69
TRIM28-204ENST00000594806 COL5A1P20908 1838 aaPredicted RBP25.62■■□□□ 1.69
TRIM28-204ENST00000594806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.61■■□□□ 1.69
TRIM28-204ENST00000594806 TMEM202A6NGA9 273 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 SCAMP1O15126 338 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 STX7O15400 261 aaKnown RBP25.61■■□□□ 1.69
TRIM28-204ENST00000594806 AQP9O43315 295 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 SDC3O75056 442 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 ZSCAN5DPP0CG00 497 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 ALPPL2P10696 532 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 PAFAH1B1P43034 410 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 CDH17Q12864 832 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 OLIG2Q13516 323 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 GLRX5Q86SX6 157 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 CREG2Q8IUH2 290 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 HID1Q8IV36 788 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 TSACCQ96A04 125 aaPredicted RBP25.61■■□□□ 1.69
TRIM28-204ENST00000594806 AGAP2Q99490 1192 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 SLC17A4Q9Y2C5 497 aa25.61■■□□□ 1.69
TRIM28-204ENST00000594806 AP3B1O00203 1094 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 TPP1O14773 563 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 CTSEP14091 401 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 CASQ1P31415 396 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 SPAM1P38567 509 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 CDK16Q00536 496 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 LAMB3Q13751 1172 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 ELOCQ15369 112 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 TRIP6Q15654 476 aaKnown RBP25.6■■□□□ 1.69
TRIM28-204ENST00000594806 TTC27Q6P3X3 843 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 PRUNE1Q86TP1 453 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 TAB3Q8N5C8 712 aaPredicted RBP25.6■■□□□ 1.69
TRIM28-204ENST00000594806 FGF22Q9HCT0 170 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 NLGN3Q9NZ94 848 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 SMARCAL1Q9NZC9 954 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 PNMA8BQ9ULN7 279 aaPredicted RBP25.6■■□□□ 1.69
TRIM28-204ENST00000594806 BTBD3Q9Y2F9 522 aa25.6■■□□□ 1.69
TRIM28-204ENST00000594806 PRSS38A1L453 326 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 KRT14P02533 472 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 CEACAM5P06731 702 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 IVLP07476 585 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 APRTP07741 180 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 HADHAP40939 763 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 PRRT3Q5FWE3 981 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 ALS2CLQ60I27 953 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 PSAPL1Q6NUJ1 521 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 LVRNQ6Q4G3 990 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 PPP1R21Q6ZMI0 780 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 ERMP1Q7Z2K6 904 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 C17orf53Q8N3J3 647 aaPredicted RBP25.59■■□□□ 1.69
TRIM28-204ENST00000594806 OR4C6Q8NH72 309 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 OR1E3Q8WZA6 343 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 TRIM44Q96DX7 344 aaPredicted RBP25.59■■□□□ 1.69
TRIM28-204ENST00000594806 SCARF2Q96GP6 870 aaPredicted RBP25.59■■□□□ 1.69
TRIM28-204ENST00000594806 RUNDC3BQ96NL0 473 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 VPS35Q96QK1 796 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 BPIFA1Q9NP55 256 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 UCKL1Q9NWZ5 548 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 VPS18Q9P253 973 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 CNOT6Q9ULM6 557 aaKnown RBP25.59■■□□□ 1.69
TRIM28-204ENST00000594806 ARL5AQ9Y689 179 aa25.59■■□□□ 1.69
TRIM28-204ENST00000594806 FADS2P1A8MWK0 482 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 GPR89AB7ZAQ6 455 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 LMO7DNF2Z398 122 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 TNFSF14O43557 240 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 GPR89BP0CG08 455 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 BASP1P80723 227 aaKnown RBP25.58■■□□□ 1.69
TRIM28-204ENST00000594806 ITGA9Q13797 1035 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 PPM1JQ5JR12 505 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 RD3Q7Z3Z2 195 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 RBFAQ8N0V3 343 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 EID2Q8N6I1 236 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 DNAAF3Q8N9W5 541 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 LMX1AQ8TE12 382 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 CAMK1GQ96NX5 476 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 LRRC61Q9BV99 259 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 RMI1Q9H9A7 625 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 IL26Q9NPH9 171 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 FTSJ1Q9UET6 329 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 APPL1Q9UKG1 709 aa25.58■■□□□ 1.69
TRIM28-204ENST00000594806 TPSB2P20231 275 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 TPSAB1Q15661 275 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 GKN2Q86XP6 184 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 SCG3Q8WXD2 468 aaKnown RBP25.57■■□□□ 1.68
TRIM28-204ENST00000594806 SLCO2A1Q92959 643 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 GLYATL1Q969I3 302 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 PDXPQ96GD0 296 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 CAPZA3Q96KX2 299 aa25.57■■□□□ 1.68
TRIM28-204ENST00000594806 TCEAL2Q9H3H9 227 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms