RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 APOL2Q9BQE5 337 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 C1QTNF7Q9BXJ2 289 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 CDH19Q9H159 772 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 ZFYVE1Q9HBF4 777 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 FZD3Q9NPG1 666 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 GDF3Q9NR23 364 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 GRHL1Q9NZI5 618 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 B4GALT6Q9UBX8 382 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 GGT7Q9UJ14 662 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 KLK13Q9UKR3 277 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 DMTF1Q9Y222 760 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 FADS3Q9Y5Q0 445 aa16.08■□□□□ 0.16
ATG4D-205ENST00000586477 COL5A1P20908 1838 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-205ENST00000586477 C1orf232A0A0U1RR37 186 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 SLC31A1O15431 190 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 FLRT2O43155 660 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 DKK1O94907 266 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ELFN1P0C7U0 828 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 FTH1P19P0C7X4 201 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ADRA1DP25100 572 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 TNFRSF8P28908 595 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 HNF1BP35680 557 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 CHRNA4P43681 627 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 RPS21P63220 83 aaKnown RBP16.07■□□□□ 0.16
ATG4D-205ENST00000586477 TAF1AQ15573 450 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-205ENST00000586477 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-205ENST00000586477 PCID2Q5JVF3 399 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 FAM182AQ5T1J6 154 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 DENND5AQ6IQ26 1287 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 RAB44Q7Z6P3 723 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ZSWIM9Q86XI8 627 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 GATAD2AQ86YP4 633 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 CHCHD4Q8N4Q1 142 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 BLOC1S5Q8TDH9 187 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 IFT81Q8WYA0 676 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 MYOCQ99972 504 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
ATG4D-205ENST00000586477 RIMKLBQ9ULI2 386 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ITM2BQ9Y287 266 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 ZNF711Q9Y462 761 aa16.07■□□□□ 0.16
ATG4D-205ENST00000586477 TCRBV7S3A2A0A539 114 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 ESYT3A0FGR9 886 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 NPIPB15A6NHN6 443 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-205ENST00000586477 BHMG1C9JSJ3 638 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-205ENST00000586477 PRAMEF26H0Y7S4 382 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 GOLGA8MH3BSY2 632 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 PCDH8O95206 1070 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 TRIM16O95361 564 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 CTPS1P17812 591 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 HMGCLP35914 325 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 HADHAP40939 763 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 SESN2P58004 480 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-205ENST00000586477 BNIP3Q12983 259 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 CBLBQ13191 982 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 GCNT7Q6ZNI0 430 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 IQCHQ86VS3 1027 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 LRRN4CLQ8ND94 238 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 FBXO25Q8TCJ0 367 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 FMO2Q99518 471 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 MRM3Q9HC36 420 aaKnown RBP16.06■□□□□ 0.16
ATG4D-205ENST00000586477 PKD2L2Q9NZM6 624 aa16.06■□□□□ 0.16
ATG4D-205ENST00000586477 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 CFAP47Q6ZTR5 3102 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 RAD51BO15315 384 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 TTC4O95801 387 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 ALPIP09923 528 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 PAMP19021 973 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 LPOP22079 712 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-205ENST00000586477 EPHA8P29322 1005 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-205ENST00000586477 MAGEA3P43357 314 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 RXRGP48443 463 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 CLDN2P57739 230 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 POU6F1Q14863 301 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 SKIDA1Q1XH10 827 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 LRRC73Q5JTD7 316 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 LRRC66Q68CR7 880 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 CASC4Q6P4E1 433 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 CRTC1Q6UUV9 634 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 KDM7AQ6ZMT4 941 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 ZNF534Q76KX8 674 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 CAND1Q86VP6 1230 aaKnown RBP16.05■□□□□ 0.16
ATG4D-205ENST00000586477 GABPB2Q8TAK5 448 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-205ENST00000586477 RHBDD1Q8TEB9 315 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 ASB12Q8WXK4 309 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 GATA6Q92908 595 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 KLF6Q99612 283 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-205ENST00000586477 ERVMER34-1Q9H9K5 563 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 NEUROG3Q9Y4Z2 214 aa16.05■□□□□ 0.16
ATG4D-205ENST00000586477 FAM221BA6H8Z2 402 aa16.04■□□□□ 0.16
ATG4D-205ENST00000586477 STX7O15400 261 aaKnown RBP16.04■□□□□ 0.16
ATG4D-205ENST00000586477 LZTS3O60299 673 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-205ENST00000586477 DFNA5O60443 496 aa16.04■□□□□ 0.16
ATG4D-205ENST00000586477 TM7SF2O76062 418 aa16.04■□□□□ 0.16
ATG4D-205ENST00000586477 PYGLP06737 847 aa16.04■□□□□ 0.16
ATG4D-205ENST00000586477 GRIA1P42261 906 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms