RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
SKA2-208ENST00000583927 GSDMDP57764 484 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CYP4F3Q08477 520 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 KIF5AQ12840 1032 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 ILF3Q12906 894 aaKnown RBP eCLIP9.84□□□□□ -0.832e-15■■■■□ 22.5
SKA2-208ENST00000583927 MPP3Q13368 585 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 LRP8Q14114 963 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 HLTFQ14527 1009 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA2-208ENST00000583927 NR1D2Q14995 579 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 PERM1Q5SV97 790 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CCDC70Q6NSX1 233 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 KDELC1Q6UW63 502 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 RFLNAQ6ZTI6 216 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 RD3Q7Z3Z2 195 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 TAF8Q7Z7C8 310 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 KIAA1328Q86T90 577 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 NRROSQ86YC3 692 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 MARCH9Q86YJ5 346 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 LSMEM2Q8N112 164 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 ZNF567Q8N184 647 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA2-208ENST00000583927 KYQ8NBH2 561 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 SPATA22Q8NHS9 363 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 EID2BQ96D98 161 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 SMIM14Q96QK8 99 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 FERMT1Q9BQL6 677 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 ZSCAN5AQ9BUG6 496 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CEP41Q9BYV8 373 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 OSBPL8Q9BZF1 889 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 FAM83DQ9H4H8 585 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 RMI1Q9H9A7 625 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CARS2Q9HA77 564 aaKnown RBP9.84□□□□□ -0.83
SKA2-208ENST00000583927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA2-208ENST00000583927 SEPT10Q9P0V9 454 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 AMFRQ9UKV5 643 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 CNOT6Q9ULM6 557 aaKnown RBP9.84□□□□□ -0.83
SKA2-208ENST00000583927 SUFUQ9UMX1 484 aa9.84□□□□□ -0.83
SKA2-208ENST00000583927 A0A0U1RQS6 177 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 CPED1A4D0V7 1026 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 TMX2-CTNND1H3BSU7 103 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 PPFIA2O75334 1257 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 KRT37O76014 449 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 TJP3O95049 919 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 MYF5P13349 255 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 HLA-DPA1P20036 260 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 HMGCLP35914 325 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ADCY8P40145 1251 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 LSSP48449 732 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 NAP1L1P55209 391 aaKnown RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 GALNT3Q14435 633 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 CLPPQ16740 277 aaPredicted RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 ISXQ2M1V0 245 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 C14orf28Q4W4Y0 310 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 PYCR3Q53H96 274 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ZDHHC20Q5W0Z9 365 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 RBM44Q6ZP01 1051 aaKnown RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 LYSMD3Q7Z3D4 306 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ZC3H18Q86VM9 953 aaKnown RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 KLHDC8BQ8IXV7 354 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 UBL4BQ8N7F7 174 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 FAM46DQ8NEK8 389 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 ACTL9Q8TC94 416 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ALG3Q92685 438 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 HAUS1Q96CS2 278 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 MRGPRX2Q96LB1 330 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 PPP1R2P1Q96PQ5 205 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 PLEKHG4BQ96PX9 1271 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 C19orf43Q9BQ61 176 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 HERPUD2Q9BSE4 406 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 RIOK2Q9BVS4 552 aaKnown RBP9.83□□□□□ -0.84
SKA2-208ENST00000583927 HACD3Q9P035 362 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 CD84Q9UIB8 345 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ZNF711Q9Y462 761 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 PCDHGA8Q9Y5G5 932 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 ST14Q9Y5Y6 855 aa9.83□□□□□ -0.84
SKA2-208ENST00000583927 GOLGA6CA6NDK9 693 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 GOLGA6BA6NDN3 693 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 FADS2P1A8MWK0 482 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 ZW10O43264 779 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 DNAJC6O75061 913 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 CSO75390 466 aaKnown RBP9.82□□□□□ -0.84
SKA2-208ENST00000583927 FGF1P05230 155 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 GOLGA6DP0CG33 693 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 PYGMP11217 842 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 NFKB1P19838 968 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 CCKBRP32239 447 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 TNNT3P45378 269 aaPredicted RBP9.82□□□□□ -0.84
SKA2-208ENST00000583927 GPR3P46089 330 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 CLCNKAP51800 687 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 WNT3AP56704 352 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 CLDN6P56747 220 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 ERVPABLB-1P60509 514 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 CTBSQ01459 385 aa9.82□□□□□ -0.84
SKA2-208ENST00000583927 OTUD4Q01804 1114 aaKnown RBP9.82□□□□□ -0.84
SKA2-208ENST00000583927 EIF3IQ13347 325 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms