RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 FGF11Q92914 225 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 HAUS1Q96CS2 278 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 FOXP3Q9BZS1 431 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 SLC25A51Q9H1U9 297 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 TRNAU1APQ9NX07 287 aaKnown RBP12.61□□□□□ -0.39
SSH2-205ENST00000577483 TAAR2Q9P1P5 351 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 CNOT6Q9ULM6 557 aaKnown RBP12.61□□□□□ -0.39
SSH2-205ENST00000577483 OAS3Q9Y6K5 1087 aaKnown RBP12.61□□□□□ -0.39
SSH2-205ENST00000577483 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
SSH2-205ENST00000577483 ATP1A1P05023 1023 aaKnown RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 FGF1P05230 155 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 CD68P34810 354 aaPredicted RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 ACTN2P35609 894 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ABCG1P45844 678 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 WASHC5Q12768 1159 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.392e-8■□□□□ 9
SSH2-205ENST00000577483 TFDP2Q14188 446 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 SPA17Q15506 151 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 TEX44Q53QW1 395 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 MARK2Q7KZI7 788 aaKnown RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 SPRED1Q7Z699 444 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 C17orf82Q86X59 251 aaPredicted RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 CCNJLQ8IV13 435 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 EXD1Q8NHP7 514 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 WDR48Q8TAF3 677 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ZDHHC1Q8WTX9 485 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ADGRE3Q9BY15 652 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 LRRN3Q9H3W5 708 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 GLOD4Q9HC38 313 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 LRIT1Q9P2V4 623 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
SSH2-205ENST00000577483 ATXN7L1Q9ULK2 861 aaPredicted RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 EPN1Q9Y6I3 576 aaPredicted RBP12.6□□□□□ -0.39
SSH2-205ENST00000577483 NR2C2P49116 596 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PYCR3Q53H96 274 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 IGF2-ASQ6U949 168 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 TMPRSS9Q7Z410 1059 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 NAGSQ8N159 534 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 Q8N9G6 341 aaPredicted RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 ACRBPQ8NEB7 543 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 OR6C4Q8NGE1 309 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 TFB1MQ8WVM0 346 aaKnown RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 TEKT5Q96M29 485 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 ZNF578Q96N58 590 aaPredicted RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 OR2M4Q96R27 311 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 LACRTQ9GZZ8 138 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 CDH19Q9H159 772 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 UBP1Q9NZI7 540 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PKD2L2Q9NZM6 624 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SMG1Q96Q15 3661 aaKnown RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 MGAQ8IWI9 3026 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 DNAJC6O75061 913 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PMPCBO75439 489 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 ZRANB2O95218 330 aaKnown RBP eCLIP12.59□□□□□ -0.39
SSH2-205ENST00000577483 ECEL1O95672 775 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SLC4A1P02730 911 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PYGLP06737 847 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PNLIPP16233 465 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 NFKB1P19838 968 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 ACTR1BP42025 376 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 ACTR1AP61163 376 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 CDK18Q07002 472 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SLC14A2Q15849 920 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 TMEM139Q8IV31 216 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 RCOR2Q8IZ40 523 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 GPR26Q8NDV2 337 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 P3H4Q92791 437 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 LIN37Q96GY3 246 aaPredicted RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
SSH2-205ENST00000577483 SLC46A1Q96NT5 459 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 FAM83DQ9H4H8 585 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 ZFYVE1Q9HBF4 777 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PRKAB1Q9Y478 270 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SPO11Q9Y5K1 396 aa12.59□□□□□ -0.39
SSH2-205ENST00000577483 SDK2Q58EX2 2172 aa12.58□□□□□ -0.39
SSH2-205ENST00000577483 ATMQ13315 3056 aa12.58□□□□□ -0.4
SSH2-205ENST00000577483 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
SSH2-205ENST00000577483 F5H423 210 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms