RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SELENOOQ9BVL4 669 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 PRORYQ9H606 182 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 SEPT11Q9NVA2 429 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 TMEM248Q9NWD8 314 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GPATCH2LQ9NWQ4 482 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 NLGN3Q9NZ94 848 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 COQ6Q9Y2Z9 468 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 DOCK4Q8N1I0 1966 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 URB1O60287 2271 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ARID1BQ8NFD5 2236 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 TCRBV5S1A1TA0A578 114 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TMEM82A0PJX8 343 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 SIGLEC16A6NMB1 481 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 AREL1O15033 823 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 RRP8O43159 456 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 AQP9O43315 295 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TSPAN6O43657 245 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 CREB3O43889 395 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 USP12O75317 370 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 KCNH1O95259 989 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 PIGNO95427 931 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 POP4O95707 220 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 GSRP00390 522 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 CD3EP07766 207 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ALPPL2P10696 532 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 NAT2P11245 290 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 EPHB2P29323 1055 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 NSFP46459 744 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 RABIFP47224 123 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ZNF143P52747 638 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 HK2P52789 917 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 PFN3P60673 137 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 RHOAP61586 193 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 HNRNPKP61978 463 aaKnown RBP eCLIP6.28□□□□□ -1.4
NUP88-212ENST00000576708 SNRPD1P62314 119 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 RPL7AP62424 266 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 GABREP78334 506 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 OGDHQ02218 1023 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 CYTH1Q15438 398 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TBC1D25Q3MII6 688 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 HS1BP3Q53T59 392 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 KCTD16Q68DU8 428 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TRIM72Q6ZMU5 477 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 EFL1Q7Z2Z2 1120 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 SLFN11Q7Z7L1 901 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 PARGQ86W56 976 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 PHF13Q86YI8 300 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 ARHGEF39Q8N4T4 335 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 RTL3Q8N8U3 475 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 TP53I13Q8NBR0 393 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 AGBL5Q8NDL9 886 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 BVESQ8NE79 360 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 NEK11Q8NG66 645 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 MAPK15Q8TD08 544 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 CENPTQ96BT3 561 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 FCRL3Q96P31 734 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 LENG8Q96PV6 779 aaPredicted RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 ALPK1Q96QP1 1244 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 AGPAT1Q99943 283 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 MCMBPQ9BTE3 642 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 CDADC1Q9BWV3 514 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TTYH3Q9C0H2 523 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 ABCG4Q9H172 646 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 MAGEH1Q9H213 219 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 TAS2R14Q9NYV8 317 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 LHX3Q9UBR4 397 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 LIMA1Q9UHB6 759 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 FZD10Q9ULW2 581 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 HPCAL4Q9UM19 191 aa6.28□□□□□ -1.4
NUP88-212ENST00000576708 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 TDRD6O60522 2096 aaKnown RBP6.28□□□□□ -1.4
NUP88-212ENST00000576708 IGSF10Q6WRI0 2623 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 BAHCC1Q9P281 2608 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 NEMP2A6NFY4 417 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 EIF4E1BA6NMX2 242 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 LGALS16A8MUM7 142 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TMCO5BA8MYB1 307 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 RASA4BC9J798 803 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 J3KR12 359 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 AGRPO00253 132 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 MUSKO15146 869 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 YY2O15391 372 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 PDPK1O15530 556 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 RASA4O43374 803 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 BUB1BO60566 1050 aaPredicted RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 C1QL1O75973 258 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 IGSF6O95976 241 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 GSTM1P09488 218 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 IFNGR1P15260 489 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 ACTN2P35609 894 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 RGRP47804 291 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 THOP1P52888 689 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms