RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 JAKMIP3Q5VZ66 844 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 CCDC144NLQ6NUI1 221 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 CWC27Q6UX04 472 aaKnown RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 Q6YL49 198 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 MMS22LQ6ZRQ5 1243 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 RINLQ6ZS11 566 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 Q6ZWC4 215 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 ZNF551Q7Z340 670 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 WDR53Q7Z5U6 358 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PIP4P1Q86T03 277 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 MFSD6LQ8IWD5 586 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SPATA18Q8TC71 538 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SMARCD2Q92925 531 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 TMEM143Q96AN5 459 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 VPS50Q96JG6 964 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 PYM1Q9BRP8 204 aaKnown RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 NXF3Q9H4D5 531 aaKnown RBP5.66□□□□□ -1.5
SF3B3-214ENST00000572365 DCTPP1Q9H773 170 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 LY9Q9HBG7 655 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 G6PC2Q9NQR9 355 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 NRBP2Q9NSY0 501 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 SERTAD4Q9NUC0 356 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 ZMYM2Q9UBW7 1377 aa5.66□□□□□ -1.5
SF3B3-214ENST00000572365 MYO9AB2RTY4 2548 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 MYBPHLA2RUH7 354 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 URI1O94763 535 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PAPSS2O95340 614 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 LARGE1O95461 756 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 ESRRBO95718 433 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CALM1P0DP23 149 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CALM2P0DP24 149 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CALM3P0DP25 149 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CKMT1AP12532 417 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 JUPP14923 745 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CREB1P16220 341 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 MX1P20591 662 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 MAKP20794 623 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 RDXP35241 583 aaKnown RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PDE1AP54750 535 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CFHR1Q03591 330 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SLC20A2Q08357 652 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 DMTNQ08495 405 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 TRAF1Q13077 416 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SEMA3BQ13214 749 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 LY6DQ14210 128 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 TAF12Q16514 161 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 COLEC12Q5KU26 742 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PLA2G4FQ68DD2 849 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 HIST2H2BCQ6DN03 193 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PCSK4Q6UW60 755 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PTCHD4Q6ZW05 846 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PARS2Q7L3T8 475 aaKnown RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SIMC1Q8NDZ2 872 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 RPLP0P6Q8NHW5 317 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CPT1BQ92523 772 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CHFRQ96EP1 664 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 ZNF577Q9BSK1 485 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 MMRN2Q9H8L6 949 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 CYP4F11Q9HBI6 524 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 ZDHHC4Q9NPG8 344 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 AGPAT5Q9NUQ2 364 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 NDUFAF4Q9P032 175 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 SEC63Q9UGP8 760 aaKnown RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 PCDHA10Q9Y5I2 948 aa5.65□□□□□ -1.5
SF3B3-214ENST00000572365 EPN1Q9Y6I3 576 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-214ENST00000572365 ITPR3Q14573 2671 aa5.65□□□□□ -1.51
SF3B3-214ENST00000572365 FLNCQ14315 2725 aa5.65□□□□□ -1.51
SF3B3-214ENST00000572365 ANK1P16157 1881 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 CKAP5Q14008 2032 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 A0A1B0GVC2 190 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 CCDC151A5D8V7 595 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 AP4M1O00189 453 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 TMPRSS11DO60235 418 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 KRT38O76015 456 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 PTMAP06454 111 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 PCP11498 1178 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 CD59P13987 128 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ADRA1DP25100 572 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 MSNP26038 577 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 TKTP29401 623 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 HOXA6P31267 233 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ELF1P32519 619 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ABCG1P45844 678 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 BRCC3P46736 316 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 AVPR1BP47901 424 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 AARSP49588 968 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 PAPOLAP51003 745 aaKnown RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ATXN3P54252 364 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 DEUP1Q05D60 604 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 SF3A3Q12874 501 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3B3-214ENST00000572365 MPP3Q13368 585 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 DNASE1L3Q13609 305 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 P3H1Q32P28 736 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 CYP4A22Q5TCH4 519 aa5.64□□□□□ -1.51
SF3B3-214ENST00000572365 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms