RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CRELD2Q6UXH1 353 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PIWIL3Q7Z3Z3 882 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 GALNT7Q86SF2 657 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CAND1Q86VP6 1230 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZSWIM9Q86XI8 627 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 BRSK2Q8IWQ3 736 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ELOA2Q8IYF1 753 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ADGRG5Q8IZF4 528 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF808Q8N4W9 903 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ARL6IP6Q8N6S5 226 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ENDOVQ8N8Q3 282 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 IL17RCQ8NAC3 791 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZBTB8BQ8NAP8 495 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MDGA1Q8NFP4 955 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 OR56A1Q8NGH5 318 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 OR52L2PQ8NGH6 319 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MOSPD2Q8NHP6 518 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 DUSP19Q8WTR2 217 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SNX19Q92543 992 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 EDAQ92838 391 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SECISBP2LQ93073 1101 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 P2RX5Q93086 422 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 FAM162AQ96A26 154 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF689Q96CS4 500 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 WDYHV1Q96HA8 205 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 C1orf74Q96LT6 269 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SPAG5Q96R06 1193 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 NEU1Q99519 415 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 UBAC1Q9BSL1 405 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MRPL1Q9BYD6 325 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 DEF6Q9H4E7 631 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 RIOX1Q9H6W3 641 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PFDN4Q9NQP4 134 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SETD4Q9NVD3 440 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 NCKIPSDQ9NZQ3 722 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 EIF2B4Q9UI10 523 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ODF2LQ9ULJ1 636 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 NENFQ9UMX5 172 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 BTBD3Q9Y2F9 522 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PTRH2Q9Y3E5 179 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SQORQ9Y6N5 450 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 BAZ2BQ9UIF8 2168 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZFHX2Q9C0A1 2572 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SPTBN4Q9H254 2564 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 RIF1Q5UIP0 2472 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 A1L4Q6 167 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TMEM221A6NGB7 291 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 URADA6NGE7 173 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TTC36A6NLP5 189 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 LRRC53A6NM62 1247 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 LOC730098B7Z3J9 87 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 M0R296 226 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SPRY2O43597 315 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CYTH3O43739 400 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SYNCRIPO60506 623 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CCNT1O60563 726 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SEMA7AO75326 666 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TACC1O75410 805 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SLC22A3O75751 556 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PSMD10O75832 226 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TUBBP07437 444 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GALTP07902 379 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ABCB1P08183 1280 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 STAG3L1P0CL83 205 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GHRP10912 638 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 C6P13671 934 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ATF7P17544 494 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CR2P20023 1033 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CPT2P23786 658 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ADRA1DP25100 572 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FMO4P31512 558 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CXCR5P32302 372 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MCM5P33992 734 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 GJC1P36383 396 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CLK3P49761 638 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PMS2P54278 862 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MFAP4P55083 255 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 HSD11B2P80365 405 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MRPS6P82932 125 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ZXDAP98168 799 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 NHLH2Q02577 135 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CEBPZQ03701 1054 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TROAPQ12815 778 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 TRDNQ13061 729 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 CAMK2DQ13557 499 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SNTB1Q13884 538 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 BTG3Q14201 252 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 FRG1Q14331 258 aaKnown RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 LPIN1Q14693 890 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 KCNMB1Q16558 191 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF674Q2M3X9 581 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 C15orf59Q2T9L4 293 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 C5orf22Q49AR2 442 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 PREPLQ4J6C6 727 aaPredicted RBP3.28□□□□□ -1.88
CNOT1-221ENST00000569924 KRBOX4Q5JUW0 171 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 COLEC12Q5KU26 742 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 SPDYAQ5MJ70 313 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 MARCH8Q5T0T0 291 aa3.28□□□□□ -1.88
CNOT1-221ENST00000569924 ATG9BQ674R7 924 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms