RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 NXPE2Q96DL1 559 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 HES6Q96HZ4 224 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 WDR24Q96S15 920 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 GULP1Q9UBP9 304 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 DOLKQ9UPQ8 538 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 LOC400499M0QZD8 3231 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 ADAMTS20P59510 1910 aa25.06■■□□□ 1.6
FANCA-228ENST00000567943 PDE2AO00408 941 aaPredicted RBP25.05■■□□□ 1.6
FANCA-228ENST00000567943 CCDC175P0C221 793 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 RBP3P10745 1247 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 GPR1P46091 355 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 RPIAP49247 311 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 CCZ1BP86790 482 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 CCZ1P86791 482 aaPredicted RBP25.05■■□□□ 1.6
FANCA-228ENST00000567943 NLRP8Q86W28 1048 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 NRROSQ86YC3 692 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 CDKL3Q8IVW4 592 aaPredicted RBP25.05■■□□□ 1.6
FANCA-228ENST00000567943 GLMNQ92990 594 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 EID2BQ96D98 161 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 ABCG4Q9H172 646 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 FAM153AQ9UHL3 310 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 MOSPD1Q9UJG1 213 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 SLC17A4Q9Y2C5 497 aa25.05■■□□□ 1.6
FANCA-228ENST00000567943 ZFC3H1O60293 1989 aaKnown RBP25.05■■□□□ 1.6
FANCA-228ENST00000567943 BPTFQ12830 3046 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 GOLGA6L3A6NEY3 463 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 CSO75390 466 aaKnown RBP25.04■■□□□ 1.6
FANCA-228ENST00000567943 PIRTP0C851 137 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 CCDC70Q6NSX1 233 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 OGFOD3Q6PK18 319 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 ADAMTSL4Q6UY14 1074 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 ZNF765Q7L2R6 523 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 TAF8Q7Z7C8 310 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 NRSN1Q8IZ57 195 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 GPR156Q8NFN8 814 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 CCHCR1Q8TD31 782 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 SCG3Q8WXD2 468 aaKnown RBP25.04■■□□□ 1.6
FANCA-228ENST00000567943 FCRL5Q96RD9 977 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 CCDC3Q9BQI4 270 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 FERMT1Q9BQL6 677 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 RSPH14Q9UHP6 348 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 RALYQ9UKM9 306 aaKnown RBP25.04■■□□□ 1.6
FANCA-228ENST00000567943 TRHDEQ9UKU6 1024 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 GPSM3Q9Y4H4 160 aa25.04■■□□□ 1.6
FANCA-228ENST00000567943 FAM208BQ5VWN6 2430 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 UNC13CQ8NB66 2214 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 A0A1W2PNU3 283 aaPredicted RBP25.03■■□□□ 1.6
FANCA-228ENST00000567943 NOBOXO60393 691 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 NDST3O95803 873 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 DARS2Q6PI48 645 aaKnown RBP25.03■■□□□ 1.6
FANCA-228ENST00000567943 KDELC1Q6UW63 502 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 LYSMD3Q7Z3D4 306 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 TRIM74Q86UV6 250 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 GPBAR1Q8TDU6 330 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 NAT6Q93015 286 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 SCARF2Q96GP6 870 aaPredicted RBP25.03■■□□□ 1.6
FANCA-228ENST00000567943 DEPDC7Q96QD5 511 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 RIOK2Q9BVS4 552 aaKnown RBP25.03■■□□□ 1.6
FANCA-228ENST00000567943 CARS2Q9HA77 564 aaKnown RBP25.03■■□□□ 1.6
FANCA-228ENST00000567943 LZTFL1Q9NQ48 299 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 SUFUQ9UMX1 484 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 SHOC2Q9UQ13 582 aa25.03■■□□□ 1.6
FANCA-228ENST00000567943 SCN8AQ9UQD0 1980 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 GOLGA6L9A6NEM1 432 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 TLX3O43711 291 aaPredicted RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 NRDCO43847 1150 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 PDX1P52945 283 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 WNT3AP56704 352 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 ISXQ2M1V0 245 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 RAVER1Q8IY67 606 aaKnown RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 FAM46DQ8NEK8 389 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 CCDC74AQ96AQ1 378 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 OXNAD1Q96HP4 312 aaPredicted RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 COX14Q96I36 57 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 SUDS3Q9H7L9 328 aaPredicted RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 ZFYVE1Q9HBF4 777 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 MAGEE1Q9HCI5 957 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 SPATS2LQ9NUQ6 558 aaKnown RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 PKD2L2Q9NZM6 624 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 CNOT6Q9ULM6 557 aaKnown RBP25.02■■□□□ 1.6
FANCA-228ENST00000567943 TMEM98Q9Y2Y6 226 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 AK5Q9Y6K8 562 aa25.02■■□□□ 1.6
FANCA-228ENST00000567943 KCNN4O15554 427 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 BRINP1O60477 761 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 SLC4A1P02730 911 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 GNPDA1P46926 289 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 SPINT3P49223 89 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 TTC13Q8NBP0 860 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 ZNF711Q9Y462 761 aa25.01■■□□□ 1.59
FANCA-228ENST00000567943 PCYT1BQ9Y5K3 369 aaPredicted RBP25.01■■□□□ 1.59
FANCA-228ENST00000567943 NTN3O00634 580 aaPredicted RBP25■■□□□ 1.59
FANCA-228ENST00000567943 USP12O75317 370 aa25■■□□□ 1.59
FANCA-228ENST00000567943 STK10O94804 968 aaKnown RBP25■■□□□ 1.59
FANCA-228ENST00000567943 IVLP07476 585 aa25■■□□□ 1.59
FANCA-228ENST00000567943 AK4P27144 223 aaPredicted RBP25■■□□□ 1.59
FANCA-228ENST00000567943 TNNT3P45378 269 aaPredicted RBP25■■□□□ 1.59
FANCA-228ENST00000567943 KLF1Q13351 362 aaPredicted RBP25■■□□□ 1.59
FANCA-228ENST00000567943 HENMT1Q5T8I9 393 aaKnown RBP25■■□□□ 1.59
FANCA-228ENST00000567943 ITPRIPL1Q6GPH6 555 aa25■■□□□ 1.59
FANCA-228ENST00000567943 DOK6Q6PKX4 331 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms