RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PYROXD1Q8WU10 500 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TEKT4Q8WW24 435 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PRCCQ92733 491 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 INPP5DQ92835 1189 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 KLHL29Q96CT2 875 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 RMDN1Q96DB5 314 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MTBPQ96DY7 904 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MCRS1Q96EZ8 462 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ZBTB45Q96K62 511 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 C9orf72Q96LT7 481 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SPATA33Q96N06 139 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TMEM237Q96Q45 408 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CYTH2Q99418 400 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ADPGKQ9BRR6 497 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CNPY3Q9BT09 278 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 INO80BQ9C086 356 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CDT1Q9H211 546 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TRABDQ9H4I3 376 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MANSC1Q9H8J5 431 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TMEM140Q9NV12 185 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TRPM5Q9NZQ8 1165 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PAK5Q9P286 719 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ZNF180Q9UJW8 692 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TRHDEQ9UKU6 1024 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 BARX2Q9UMQ3 279 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 R3HDM2Q9Y2K5 976 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 IKBKGQ9Y6K9 419 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 EP300Q09472 2414 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ANKRD11Q6UB99 2663 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 F8VP50 259 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RNASET2O00584 256 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 TRDMT1O14717 391 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MDM4O15151 490 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 XPOTO43592 962 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PRPSAP2O60256 369 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CST8O60676 142 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 LRCH4O75427 683 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 UNC5CO95185 931 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 TGDSO95455 350 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 IFNB1P01574 187 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 KRT19P08727 400 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 FAM163BP0C2L3 166 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CCNB1P14635 433 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 LAG3P18627 525 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 TAC1P20366 129 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 GPD1P21695 349 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CA4P22748 312 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 KDELR1P24390 212 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CNTFP26441 200 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 GJC1P36383 396 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 WASP42768 502 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MSH2P43246 934 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MAGEA6P43360 314 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 IFNAR2P48551 515 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 NR2C2P49116 596 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 VPS41P49754 854 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CLCN5P51795 746 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RAD23BP54727 409 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 INHBCP55103 352 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SARNPP82979 210 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 OTUD4Q01804 1114 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ROR1Q01973 937 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CDK18Q07002 472 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 DPTQ07507 201 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PDIA2Q13087 525 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 DNAJC3Q13217 504 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 GPM6BQ13491 265 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 TMED2Q15363 201 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 TRIP13Q15645 432 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PARP6Q2NL67 630 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 DUSP28Q4G0W2 176 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PTPN20Q4JDL3 420 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SLC45A4Q5BKX6 768 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 LY6G5CQ5SRR4 150 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 WLSQ5T9L3 541 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 HHATQ5VTY9 493 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 AFMIDQ63HM1 303 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 KAZNQ674X7 775 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 LCLAT1Q6UWP7 414 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CYS1Q717R9 158 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 LRRC8DQ7L1W4 858 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 UNC93AQ86WB7 457 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 PSTKQ8IV42 348 aaKnown RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 CDKL3Q8IVW4 592 aaPredicted RBP5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ULK2Q8IYT8 1036 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 HACE1Q8IYU2 909 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ANKRD42Q8N9B4 389 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 SMRP1Q8NCR6 262 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MCUQ8NE86 351 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RAB3IL1Q8TBN0 382 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 ACTL9Q8TC94 416 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 DENND1AQ8TEH3 1009 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 RTP4Q96DX8 246 aa5.38□□□□□ -1.55
CAPN3-217ENST00000567817 MYEOVQ96EZ4 313 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms