RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NDST3O95803 873 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 ITGA2BP08514 1039 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 TNNT1P13805 278 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 CDC25BP30305 580 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 INHBCP55103 352 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 DYNLT1P63172 113 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 NR1D2Q14995 579 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 QPCTQ16769 361 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 CCDC181Q5TID7 509 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 ITPRIPL1Q6GPH6 555 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 CNTD1Q8N815 330 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 DTX3LQ8TDB6 740 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 ZDHHC1Q8WTX9 485 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 TADA1Q96BN2 335 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 AGAP3Q96P47 875 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 PLEKHG4BQ96PX9 1271 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 B3GNT4Q9C0J1 378 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 LRRN3Q9H3W5 708 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 SYNDIG1Q9H7V2 258 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 MRPL40Q9NQ50 206 aaKnown RBP16.64■□□□□ 0.25
USB1-211ENST00000565662 TAAR2Q9P1P5 351 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 KLHL8Q9P2G9 620 aaPredicted RBP16.64■□□□□ 0.25
USB1-211ENST00000565662 LRIT1Q9P2V4 623 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 PCDHB1Q9Y5F3 818 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 RP1P56715 2156 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 OR5K4A6NMS3 321 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 RHPN2P1A8MT19 583 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 MIF4GDA9UHW6 222 aaKnown RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 NOBOXO60393 691 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 CLDN7O95471 211 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 RPLP0P05388 317 aaKnown RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 CELA2BP08218 269 aaPredicted RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 MMP2P08253 660 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 HLA-DPA1P20036 260 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 PTPN3P26045 913 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 CTNNA2P26232 953 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 VAV2P52735 878 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 NAP1L1P55209 391 aaKnown RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 GPLD1P80108 840 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 MPP3Q13368 585 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 BBS12Q6ZW61 710 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 ZNF438Q7Z4V0 828 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 PHYKPLQ8IUZ5 450 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 TRAM1L1Q8N609 369 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 SH3KBP1Q96B97 665 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 QKIQ96PU8 341 aaKnown RBP eCLIP16.63■□□□□ 0.25
USB1-211ENST00000565662 TRIB3Q96RU7 358 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 HERPUD2Q9BSE4 406 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 RIOK2Q9BVS4 552 aaKnown RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 GPR63Q9BZJ6 419 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
USB1-211ENST00000565662 CARD9Q9H257 536 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 EPB41L1Q9H4G0 881 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 ASXL3Q9C0F0 2248 aa16.63■□□□□ 0.25
USB1-211ENST00000565662 GOLGA6L9A6NEM1 432 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 ANXA9O76027 345 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 TJP3O95049 919 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 ASMTLO95671 621 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 CPNE6O95741 557 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 SOD1P00441 154 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 ADCY8P40145 1251 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 ACTR1BP42025 376 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 CLDN6P56747 220 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 RWDD2BP57060 319 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 ACTR1AP61163 376 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 TRA2AQ13595 282 aaKnown RBP eCLIP16.62■□□□□ 0.25
USB1-211ENST00000565662 C3orf38Q5JPI3 329 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 KAZNQ674X7 775 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 SPRED1Q7Z699 444 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 MARCH9Q86YJ5 346 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
USB1-211ENST00000565662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.62■□□□□ 0.25
USB1-211ENST00000565662 UBL4BQ8N7F7 174 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 TTC13Q8NBP0 860 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 HTR3CQ8WXA8 447 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 DCBLD2Q96PD2 775 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 FCRL5Q96RD9 977 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 CMKLR1Q99788 373 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
USB1-211ENST00000565662 FSD1LQ9BXM9 530 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 CD84Q9UIB8 345 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 SATB2Q9UPW6 733 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 PCDHA3Q9Y5H8 950 aa16.62■□□□□ 0.25
USB1-211ENST00000565662 COL27A1Q8IZC6 1860 aaPredicted RBP16.62■□□□□ 0.25
USB1-211ENST00000565662 ZFC3H1O60293 1989 aaKnown RBP16.62■□□□□ 0.25
USB1-211ENST00000565662 PLD2O14939 933 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 PJA2O43164 708 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 VEGFDO43915 354 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 MPOP05164 745 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 FGF1P05230 155 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 CD82P27701 267 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 FASLGP48023 281 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 CLCNKAP51800 687 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 PDE1BQ01064 536 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 CTBSQ01459 385 aa16.61■□□□□ 0.25
USB1-211ENST00000565662 KIF5AQ12840 1032 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms