RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 AGAP3Q96P47 875 aa14.63□□□□□ -0.07
USB1-210ENST00000565151 GFM1Q96RP9 751 aaKnown RBP14.63□□□□□ -0.07
USB1-210ENST00000565151 SEMA6CQ9H3T2 930 aa14.63□□□□□ -0.07
USB1-210ENST00000565151 PRKAB1Q9Y478 270 aa14.63□□□□□ -0.07
USB1-210ENST00000565151 CCDC187A0A096LP49 1063 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 RCCD1A6NED2 376 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 PDE2AO00408 941 aaPredicted RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 PPM1DO15297 605 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 EFSO43281 561 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 DNAJC6O75061 913 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 LCA5LO95447 670 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 MT-CYBP00156 380 aaPredicted RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 PRB1P04280 392 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 ATP1A1P05023 1023 aaKnown RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 PNLIPP16233 465 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 ZNF30P17039 623 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 CES1P23141 567 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 CD68P34810 354 aaPredicted RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 UGT1A5P35504 534 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 DYNLT1P63172 113 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 AP1B1Q10567 949 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 SRSF6Q13247 344 aaKnown RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 NR1D2Q14995 579 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 ZFYVE27Q5T4F4 411 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 ZNF648Q5T619 568 aaPredicted RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 HENMT1Q5T8I9 393 aaKnown RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 LYSMD3Q7Z3D4 306 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 KDELC2Q7Z4H8 507 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 VSIG1Q86XK7 387 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 LSMEM2Q8N112 164 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 WDR48Q8TAF3 677 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 GRAMD1AQ96CP6 724 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 FCRL3Q96P31 734 aaPredicted RBP14.62□□□□□ -0.07
USB1-210ENST00000565151 HERPUD2Q9BSE4 406 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 RDH14Q9HBH5 336 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 EPB41L5Q9HCM4 733 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 KCTD5Q9NXV2 234 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 INTUQ9ULD6 942 aa14.62□□□□□ -0.07
USB1-210ENST00000565151 C1orf232A0A0U1RR37 186 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 APOL1O14791 398 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 AURKAO14965 403 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 NUDT21O43809 227 aaKnown RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 C1QL1O75973 258 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 ITIH1P19827 911 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 CCKBRP32239 447 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 EPHB1P54762 984 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 HADHBP55084 474 aaKnown RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 INHBCP55103 352 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 RPL26P61254 145 aaKnown RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 WASHC5Q12768 1159 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 CLN3Q13286 438 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 C16orf72Q14CZ0 275 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 PRKD1Q15139 912 aaPredicted RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 NOMO1Q15155 1222 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 TSR1Q2NL82 804 aaKnown RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 RAB11FIP2Q7L804 512 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 RFX6Q8HWS3 928 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 NRSN1Q8IZ57 195 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 OR6C4Q8NGE1 309 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 KRT35Q92764 455 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 NUDT22Q9BRQ3 303 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 ARFGAP3Q9NP61 516 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 THSD1Q9NS62 852 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 LCMT1Q9UIC8 334 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 TMPRSS11EQ9UL52 423 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 RPL26L1Q9UNX3 145 aaKnown RBP14.61□□□□□ -0.07
USB1-210ENST00000565151 SPO11Q9Y5K1 396 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 ALG6Q9Y672 507 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 BOD1L1Q8NFC6 3051 aa14.61□□□□□ -0.07
USB1-210ENST00000565151 TRBV23OR9-2A0A075B6M9 112 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 PLD2O14939 933 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 KLK10O43240 276 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 PTPN3P26045 913 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 CD1CP29017 333 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 RBMS1P29558 406 aaKnown RBP14.6□□□□□ -0.07
USB1-210ENST00000565151 CSF2RBP32927 897 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 CA5AP35218 305 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 MAGEA1P43355 309 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 ARSDP51689 593 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 CXADRP78310 365 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 TGIF1Q15583 401 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 NKAIN2Q5VXU1 208 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 SPOCD1Q6ZMY3 1216 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 USP53Q70EK8 1073 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 CNGA4Q8IV77 575 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 RHOT1Q8IXI2 618 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 FBXO39Q8N4B4 442 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 GPR26Q8NDV2 337 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 KCNE4Q8WWG9 221 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 OR2M4Q96R27 311 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 MLPHQ9BV36 600 aaPredicted RBP14.6□□□□□ -0.07
USB1-210ENST00000565151 GSDMCQ9BYG8 508 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 RBSNQ9H1K0 784 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 SLC25A51Q9H1U9 297 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 TMEM9Q9P0T7 183 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 SHOC2Q9UQ13 582 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 REXO2Q9Y3B8 237 aaKnown RBP14.6□□□□□ -0.07
USB1-210ENST00000565151 ADGRG1Q9Y653 693 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 CFAP46Q8IYW2 2715 aa14.6□□□□□ -0.07
USB1-210ENST00000565151 A6NCN8 305 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms