RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CLPBQ9H078 707 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 CDH19Q9H159 772 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 C10orf88Q9H8K7 445 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 FGF22Q9HCT0 170 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 SIRPGQ9P1W8 387 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 PNMA8BQ9ULN7 279 aaPredicted RBP13.61□□□□□ -0.23
CNOT1-206ENST00000564557 AAR2Q9Y312 384 aaKnown RBP13.61□□□□□ -0.23
CNOT1-206ENST00000564557 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
CNOT1-206ENST00000564557 FAM149AA5PLN7 773 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 INPP4BO15327 924 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
CNOT1-206ENST00000564557 EPOP01588 193 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 GP1BAP07359 652 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 BIRC2Q13490 618 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 ANKRD20A2Q5SQ80 823 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 HES3Q5TGS1 186 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 ANKRD20A1Q5TYW2 823 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 ANKRD20A3Q5VUR7 823 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 EFL1Q7Z2Z2 1120 aaKnown RBP13.6□□□□□ -0.23
CNOT1-206ENST00000564557 ARL10Q8N8L6 244 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 TADA1Q96BN2 335 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 BOCQ9BWV1 1114 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 TMEM168Q9H0V1 697 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 GBA3Q9H227 469 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 DPEP2Q9H4A9 486 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 TRABDQ9H4I3 376 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 HACD3Q9P035 362 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 PADI4Q9UM07 663 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 CLCA2Q9UQC9 943 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 ZNF711Q9Y462 761 aa13.6□□□□□ -0.23
CNOT1-206ENST00000564557 GOLGA4Q13439 2230 aaKnown RBP13.6□□□□□ -0.23
CNOT1-206ENST00000564557 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 C1QTNF9BB2RNN3 333 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 CEACAM5P06731 702 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 PROS1P07225 676 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 CELA2BP08218 269 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-206ENST00000564557 C1QTNF9P0C862 333 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 HLA-DPA1P20036 260 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 ALS2CLQ60I27 953 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 ARHGEF18Q6ZSZ5 1173 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
CNOT1-206ENST00000564557 GALNT13Q8IUC8 556 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 HERPUD2Q9BSE4 406 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 FRMD8Q9BZ67 464 aaPredicted RBP13.59□□□□□ -0.23
CNOT1-206ENST00000564557 SYNDIG1Q9H7V2 258 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
CNOT1-206ENST00000564557 SUFUQ9UMX1 484 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 TMEM98Q9Y2Y6 226 aa13.59□□□□□ -0.23
CNOT1-206ENST00000564557 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 EME2A4GXA9 379 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-206ENST00000564557 OPA1O60313 960 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 MT-CO3P00414 261 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 FGF1P05230 155 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 IVLP07476 585 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ACTN2P35609 894 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 POLD2P49005 469 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ST3GAL2Q16842 350 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 SIRPB2Q5JXA9 342 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ZNF569Q5MCW4 686 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ZDHHC20Q5W0Z9 365 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 GUSBP11Q6P575 273 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ZNF662Q6ZS27 426 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 GLT6D1Q7Z4J2 308 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 TMC3Q7Z5M5 1100 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 TRIM74Q86UV6 250 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 SLC35F3Q8IY50 421 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 TRIM58Q8NG06 486 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 CCDC110Q8TBZ0 833 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 BLOC1S5Q8TDH9 187 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 GATA6Q92908 595 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 OXNAD1Q96HP4 312 aaPredicted RBP13.58□□□□□ -0.24
CNOT1-206ENST00000564557 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 SPATA13Q96N96 652 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 AGAP2Q99490 1192 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 ZNHIT2Q9UHR6 403 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 SLC17A4Q9Y2C5 497 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 PKP3Q9Y446 797 aa13.58□□□□□ -0.24
CNOT1-206ENST00000564557 B4DGG1 531 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 ZW10O43264 779 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 SLC25A14O95258 325 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-206ENST00000564557 PSMB4P28070 264 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 CLDN6P56747 220 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 CCZ1BP86790 482 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-206ENST00000564557 INSM1Q01101 510 aaPredicted RBP13.57□□□□□ -0.24
CNOT1-206ENST00000564557 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
CNOT1-206ENST00000564557 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
CNOT1-206ENST00000564557 PDPK2PQ6A1A2 396 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 MARCH9Q86YJ5 346 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 TRAM1L1Q8N609 369 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 KYQ8NBH2 561 aa13.57□□□□□ -0.24
CNOT1-206ENST00000564557 WDR48Q8TAF3 677 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms