RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DLSTP36957 453 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 CHAF1BQ13112 559 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 SEMA5AQ13591 1074 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 C1QL3Q5VWW1 255 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 PAPD7Q5XG87 772 aaKnown RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 MAMDC2Q7Z304 686 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 GALNT6Q8NCL4 622 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 SCAMP4Q969E2 229 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 TBC1D10AQ9BXI6 508 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 ABCG8Q9H221 673 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 SARS2Q9NP81 518 aaKnown RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 CNOT6Q9ULM6 557 aaKnown RBP10.29□□□□□ -0.76
SF3B3-204ENST00000563739 PCDHGC4Q9Y5F7 938 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 PCDHGA6Q9Y5G7 932 aa10.29□□□□□ -0.76
SF3B3-204ENST00000563739 DCHS2Q6V1P9 2916 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 GOLGA6L4A6NEF3 574 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 UCHL3P15374 230 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 GPD1P21695 349 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 KLK7P49862 253 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 NDST2P52849 883 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 JAM2P57087 298 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 BPIFB4P59827 614 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 RPL7AP62424 266 aaKnown RBP10.28□□□□□ -0.76
SF3B3-204ENST00000563739 UBE2IP63279 158 aaKnown RBP10.28□□□□□ -0.76
SF3B3-204ENST00000563739 MC1RQ01726 317 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 CDR2Q01850 454 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 DPTQ07507 201 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 BCL2L1Q07817 233 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 SLC10A7Q0GE19 358 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 IL10RAQ13651 578 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 ADAMTSL4Q6UY14 1074 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 MARK2Q7KZI7 788 aaKnown RBP10.28□□□□□ -0.76
SF3B3-204ENST00000563739 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 ESX1Q8N693 406 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 CT55Q8WUE5 264 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 PSKH2Q96QS6 385 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 KCTD15Q96SI1 283 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-204ENST00000563739 ZPBPQ9BS86 351 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 EFHD1Q9BUP0 239 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-204ENST00000563739 KLHL3Q9UH77 587 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 CD84Q9UIB8 345 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 POLHQ9Y253 713 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 PRKAB1Q9Y478 270 aa10.28□□□□□ -0.76
SF3B3-204ENST00000563739 CDC14CA4D256 554 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 PDE2AO00408 941 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 FGF10O15520 208 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 FZD6O60353 706 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 VPS4BO75351 444 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 CREG1O75629 220 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 CPP00450 1065 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 PDHA1P08559 390 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 LEPRP48357 1165 aaKnown RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 AP1S1P61966 158 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 RPS18P62269 152 aaKnown RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 HHEXQ03014 270 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 NSUN2Q08J23 767 aaKnown RBP eCLIP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 NFATC2Q13469 925 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 DNASE1L3Q13609 305 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 SEPT6Q14141 434 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 EIF2S3LQ2VIR3 472 aaKnown RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 DENND2CQ68D51 928 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 RAET1GQ6H3X3 334 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 IYDQ6PHW0 289 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 KDELC2Q7Z4H8 507 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 C3orf20Q8ND61 904 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 OR10G6Q8NH81 332 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 PIH1D2Q8WWB5 315 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 NCSTNQ92542 709 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 ULBP3Q9BZM4 244 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 TRIT1Q9H3H1 467 aaKnown RBP10.27□□□□□ -0.77
SF3B3-204ENST00000563739 NDST4Q9H3R1 872 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 LUZP4Q9P127 313 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 PPIL1Q9Y3C6 166 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 ADGRG1Q9Y653 693 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 SLC30A1Q9Y6M5 507 aa10.27□□□□□ -0.77
SF3B3-204ENST00000563739 LILRA5A6NI73 299 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PSMD11O00231 422 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 POLR1CO15160 346 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 SOCS5O75159 536 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PALMO75781 387 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CEACAM4O75871 244 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 GFPT2O94808 682 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 SPTBP11277 2137 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 KRT3P12035 628 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 ERCC5P28715 1186 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 SCNN1BP51168 640 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF143P52747 638 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 EPHA4P54764 986 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PPP1CAP62136 330 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 INPP5JQ15735 1006 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms