RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 WBP1LQ9NX94 342 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 FOCADQ5VW36 1801 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 BANF1O75531 89 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 OTCP00480 354 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 BPGMP07738 259 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 EPB42P16452 691 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 CYS1Q717R9 158 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 CIR1Q86X95 450 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 PHYKPLQ8IUZ5 450 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NAT16Q8N8M0 369 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 CNDP1Q96KN2 507 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PRICKLE1Q96MT3 831 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 TRMT61BQ9BVS5 477 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 ALG9Q9H6U8 611 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 NMUR1Q9HB89 426 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 XPR1Q9UBH6 696 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 STMND1H3BQB6 276 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 HDAC3O15379 428 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SNX3O60493 162 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 CXCL10P02778 98 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 RHOP08100 348 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SUOXP51687 545 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 MRPS15P82914 257 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 OCA2Q04671 838 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SCRN3Q0VDG4 424 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 GRSF1Q12849 480 aaKnown RBP eCLIP7.53□□□□□ -1.2
TCF4-216ENST00000562680 GRAMD1BQ3KR37 738 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PIWIL1Q96J94 861 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 TBATAQ96M53 351 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 HGH1Q9BTY7 390 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SNX6Q9UNH7 406 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 EDDM13A0A1B0GTR0 161 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NCF1BA6NI72 391 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 LRRC72A6NJI9 287 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NCF1CA8MVU1 366 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC25A14O95258 325 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 MT-CYBP00156 380 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 SERPIND1P05546 499 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 EPHX1P07099 455 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PIRTP0C851 137 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NCF1P14598 390 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 ACADSP16219 412 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 ITGB6P18564 788 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NAGLUP54802 743 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC10A7Q0GE19 358 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 TEAD2Q15562 447 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SGO1Q5FBB7 561 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 LHX8Q68G74 356 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 FOXR1Q6PIV2 292 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 GPRIN1Q7Z2K8 1008 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 TOR1AIP2Q8NFQ8 470 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 KCTD4Q8WVF5 259 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC25A23Q9BV35 468 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 TTLL2Q9BWV7 592 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 C8orf4Q9NR00 106 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 GREB1LQ9C091 1923 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 KIAA0100Q14667 2235 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 A0A088AWK7 358 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 C5orf58C9J3I9 102 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 AIM2O14862 343 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NPC1O15118 1278 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 BUD23O43709 281 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 ATG13O75143 517 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 TGDSO95455 350 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 KRT8P05787 483 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC2A4P14672 509 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 ZNF10P21506 573 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 PTPN4P29074 926 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 RPL3P39023 403 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 SLC26A3P40879 764 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NSG1P42857 185 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NRIP1P48552 1158 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 HSPA14Q0VDF9 509 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 BST1Q10588 318 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 SPDYE7PQ495Y7 208 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 LDLRAP1Q5SW96 308 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 LINGO4Q6UY18 593 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 LRRTM3Q86VH5 581 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 KRT78Q8N1N4 520 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 C3orf58Q8NDZ4 430 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 JADE3Q92613 823 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 POP5Q969H6 163 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 MFSD3Q96ES6 412 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 OXNAD1Q96HP4 312 aaPredicted RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 NUDT4Q9NZJ9 180 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 FCF1Q9Y324 198 aaKnown RBP7.53□□□□□ -1.2
TCF4-216ENST00000562680 PCDHGC4Q9Y5F7 938 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 COMMD3-BMI1R4GMX3 469 aa7.53□□□□□ -1.2
TCF4-216ENST00000562680 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.2
TCF4-216ENST00000562680 MGAT4DA6NG13 374 aa7.52□□□□□ -1.21
TCF4-216ENST00000562680 NDUFS2O75306 463 aa7.52□□□□□ -1.21
TCF4-216ENST00000562680 STC2O76061 302 aa7.52□□□□□ -1.21
TCF4-216ENST00000562680 LBPP18428 481 aa7.52□□□□□ -1.21
TCF4-216ENST00000562680 GSTT1P30711 240 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms