RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ACTR1AP61163 376 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 LRP8Q14114 963 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 C3orf38Q5JPI3 329 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 BBS12Q6ZW61 710 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 MARK2Q7KZI7 788 aaKnown RBP17.72■□□□□ 0.43
CMTM3-204ENST00000562357 LYSMD3Q7Z3D4 306 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 TRIM74Q86UV6 250 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 Q8N9G6 341 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-204ENST00000562357 SNIP1Q8TAD8 396 aaKnown RBP17.72■□□□□ 0.43
CMTM3-204ENST00000562357 KRT35Q92764 455 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 ATXN7L3BQ96GX2 97 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 ZNF578Q96N58 590 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-204ENST00000562357 HEMGNQ9BXL5 484 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 STRADBQ9C0K7 418 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 MAGEE1Q9HCI5 957 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 THSD1Q9NS62 852 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 LRIT1Q9P2V4 623 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 FAM153AQ9UHL3 310 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 APPL1Q9UKG1 709 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 TMEM98Q9Y2Y6 226 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 ENTPD2Q9Y5L3 495 aa17.72■□□□□ 0.43
CMTM3-204ENST00000562357 FREM2Q5SZK8 3169 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 LRP4O75096 1905 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 RHPN2P1A8MT19 583 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 D6RAR5 112 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 H7C0C1 242 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 NUDT21O43809 227 aaKnown RBP17.71■□□□□ 0.43
CMTM3-204ENST00000562357 NOBOXO60393 691 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 APOC2P02655 101 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 ATP5OP48047 213 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 RWDD2BP57060 319 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 CTBSQ01459 385 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
CMTM3-204ENST00000562357 ZNF569Q5MCW4 686 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 HENMT1Q5T8I9 393 aaKnown RBP17.71■□□□□ 0.43
CMTM3-204ENST00000562357 RAD9BQ6WBX8 426 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 PID1Q7Z2X4 250 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 GAS2L3Q86XJ1 694 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 SPATA22Q8NHS9 363 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 HTR3CQ8WXA8 447 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 TMEM74Q96NL1 305 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 QKIQ96PU8 341 aaKnown RBP eCLIP17.71■□□□□ 0.43
CMTM3-204ENST00000562357 TRIB3Q96RU7 358 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 AGAP2Q99490 1192 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 SPATA16Q9BXB7 569 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 LRRN3Q9H3W5 708 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 VPS18Q9P253 973 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 TRHDEQ9UKU6 1024 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 SATB2Q9UPW6 733 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 SHOC2Q9UQ13 582 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 ZNF711Q9Y462 761 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 PCDHA3Q9Y5H8 950 aa17.71■□□□□ 0.43
CMTM3-204ENST00000562357 URB1O60287 2271 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 CCDC187A0A096LP49 1063 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 NTN3O00634 580 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 DXOO77932 396 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 STK10O94804 968 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 NFKB1P19838 968 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 AK4P27144 223 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 CDC25BP30305 580 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 EIF2S3P41091 472 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 PCBP4P57723 403 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ERVPABLB-1P60509 514 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 CCL7P80098 99 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 WASHC5Q12768 1159 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 KIF5AQ12840 1032 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 EIF3IQ13347 325 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 XRCC4Q13426 336 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 COL28A1Q2UY09 1125 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ALS2CLQ60I27 953 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 FOXR1Q6PIV2 292 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 SYCE1Q8N0S2 351 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ARL14Q8N4G2 192 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ZNF248Q8NDW4 579 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ACRBPQ8NEB7 543 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 WDR36Q8NI36 951 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 TADA1Q96BN2 335 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 SCARF2Q96GP6 870 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 COX14Q96I36 57 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ZSCAN5AQ9BUG6 496 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 FSD1LQ9BXM9 530 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 RMI1Q9H9A7 625 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 SPATS2LQ9NUQ6 558 aaKnown RBP17.7■□□□□ 0.42
CMTM3-204ENST00000562357 UBP1Q9NZI7 540 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 RSPH14Q9UHP6 348 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 ZNHIT2Q9UHR6 403 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 RABGEF1Q9UJ41 708 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 EFR3BQ9Y2G0 817 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 RNF215Q9Y6U7 377 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 MYLKQ15746 1914 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 FAM208BQ5VWN6 2430 aa17.7■□□□□ 0.42
CMTM3-204ENST00000562357 RCCD1A6NED2 376 aa17.69■□□□□ 0.42
CMTM3-204ENST00000562357 TLX3O43711 291 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-204ENST00000562357 ZNF189O75820 626 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-204ENST00000562357 FUCA1P04066 466 aa17.69■□□□□ 0.42
CMTM3-204ENST00000562357 PIRTP0C851 137 aa17.69■□□□□ 0.42
CMTM3-204ENST00000562357 INHBCP55103 352 aa17.69■□□□□ 0.42
CMTM3-204ENST00000562357 WNT3AP56704 352 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms