RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GOLGA8AA7E2F4 631 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 KPNA7A9QM74 516 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 GABRDO14764 452 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CLDN3O15551 220 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 LATO43561 262 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 TIMM44O43615 452 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CCNT1O60563 726 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 ULK1O75385 1050 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 MED24O75448 989 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 PIAS2O75928 621 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 NEBLO76041 1014 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 PENKP01210 267 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 ITIH1P19827 911 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 FDXRP22570 491 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 GCSHP23434 173 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 BDNFP23560 247 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 LMO1P25800 156 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CXCR5P32302 372 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 ETV5P41161 510 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 TAF6P49848 677 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CACNA2D1P54289 1103 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 ELLP55199 621 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 PEX3P56589 373 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 MYL7Q01449 175 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 OCA2Q04671 838 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 OVGP1Q12889 678 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 EIF3IQ13347 325 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 DRAP1Q14919 205 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 ZNF169Q14929 603 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 ADRM1Q16186 407 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 SMTNL2Q2TAL5 461 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 EARS2Q5JPH6 523 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 HECTD3Q5T447 861 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 JADE1Q6IE81 842 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 NAPEPLDQ6IQ20 393 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 VSTM1Q6UX27 236 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 SERPINA13PQ6UXR4 307 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 SPATA2LQ8IUW3 424 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 DAW1Q8N136 415 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 ZNF366Q8N895 744 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CCDC148Q8NFR7 591 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 OR2T34Q8NGX1 318 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 JPH3Q8WXH2 748 aaPredicted RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 USP7Q93009 1102 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 IFT74Q96LB3 600 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 TCEANC2Q96MN5 208 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CCDC43Q96MW1 224 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 CATSPER2Q96P56 530 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 NTPCRQ9BSD7 190 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 PABPC3Q9H361 631 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 IFT22Q9H7X7 185 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 SH3GLB2Q9NR46 395 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 TMEM30AQ9NV96 361 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 FBXL12Q9NXK8 326 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 PCDHA12Q9UN75 941 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 L1RE1Q9UN81 338 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 CUBNO60494 3623 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 MED13LQ71F56 2210 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 LRRK1Q38SD2 2015 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 MYO18AQ92614 2054 aaKnown RBP3.88□□□□□ -1.79
HERC1-211ENST00000560983 TMEM131Q92545 1883 aa3.88□□□□□ -1.79
HERC1-211ENST00000560983 SVILO95425 2214 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 DCHS2Q6V1P9 2916 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 KLF18A0A0U1RQI7 1052 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 CCDC78A2IDD5 438 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 EFCAB7A8K855 629 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 NEMP1O14524 444 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 XPOTO43592 962 aaKnown RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 JAK2O60674 1132 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 CBX6O95503 412 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 NADKO95544 446 aaPredicted RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 TBX18O95935 607 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 KLKB1P03952 638 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 DNTTP04053 509 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 ZDHHC11BP0C7U3 371 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 IRF1P10914 325 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 ITGAMP11215 1152 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 LIFP15018 202 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 GCFC2P16383 781 aaKnown RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 LMO2P25791 158 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 CHMLP26374 656 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 CDC25AP30304 524 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 PTH2RP49190 550 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 RCAN1P53805 252 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 PPP3CAQ08209 521 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 NECTIN1Q15223 517 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 ERCC6LQ2NKX8 1250 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 MUM1Q2TAK8 710 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 SLC45A4Q5BKX6 768 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 ASB18Q6ZVZ8 466 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 NEK8Q86SG6 692 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 THNSL2Q86YJ6 484 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 ZC3H3Q8IXZ2 948 aaKnown RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 BOLLQ8N9W6 283 aaKnown RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 UCMAQ8WVF2 138 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 APOBEC4Q8WW27 367 aaKnown RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 KIFAP3Q92845 792 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms