RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GPATCH1Q9BRR8 931 aaKnown RBP8.55□□□□□ -1.04
CCDC33-209ENST00000560565 COLEC11Q9BWP8 271 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 SHCBP1LQ9BZQ2 653 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A7Q9HAW7 530 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A10Q9HAW8 530 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A8Q9HAW9 530 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 CASS4Q9NQ75 786 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 ENTPD7Q9NQZ7 604 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 ARHGEF38Q9NXL2 777 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 SMPD3Q9NY59 655 aaPredicted RBP8.55□□□□□ -1.04
CCDC33-209ENST00000560565 ACTR3BQ9P1U1 418 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 HMGXB4Q9UGU5 601 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 PSME2Q9UL46 239 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 ERGIC3Q9Y282 383 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 PCDHGA7Q9Y5G6 932 aa8.55□□□□□ -1.04
CCDC33-209ENST00000560565 FASNP49327 2511 aaKnown RBP8.55□□□□□ -1.04
CCDC33-209ENST00000560565 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 TMEM247A6NEH6 219 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 TCAF2A6NFQ2 919 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CLDN25C9JDP6 229 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 H3BQ06 376 aaPredicted RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PER2O15055 1255 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ANGPT2O15123 496 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 GRID2O43424 1007 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SERPINB7O75635 380 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CLPXO76031 633 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CPNE6O95741 557 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 F9P00740 461 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ALBP02768 609 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SPATA31D3P0C874 917 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PTPN1P18031 435 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PCSK6P29122 969 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 EPHA3P29320 983 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 EEF1DP29692 281 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 MATKP42679 507 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 NRIP1P48552 1158 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 MRPL19P49406 292 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ENTPD1P49961 510 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ERFP50548 548 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SLC5A3P53794 718 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CDKL1Q00532 357 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PLOD1Q02809 727 aaPredicted RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 GSTM4Q03013 218 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 KCNC4Q03721 635 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 NSUN2Q08J23 767 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 RIPPLY1Q0D2K3 151 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ADAM15Q13444 863 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 LRP8Q14114 963 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 COL19A1Q14993 1142 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 NRF1Q16656 503 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 LEXMQ3ZCV2 418 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PCID2Q5JVF3 399 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 VWA5B1Q5TIE3 1220 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 WSCD1Q658N2 575 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CD300LGQ6UXG3 332 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SPATA31D4Q6ZUB0 917 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PID1Q7Z2X4 250 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SPRED1Q7Z699 444 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ADGRD2Q7Z7M1 963 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ACOT1Q86TX2 421 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 LRRC49Q8IUZ0 686 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 LILRA2Q8N149 483 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 MPP5Q8N3R9 675 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 EFHBQ8N7U6 833 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CCNYQ8ND76 341 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 PPHLN1Q8NEY8 458 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SNRNP27Q8WVK2 155 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 LPGAT1Q92604 370 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 NTAN1Q96AB6 310 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 HSPBAP1Q96EW2 488 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 P2RY11Q96G91 374 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 IGSF21Q96ID5 467 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 NPLQ9BXD5 320 aaPredicted RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 GBA3Q9H227 469 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 RAD21L1Q9H4I0 556 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 HPS4Q9NQG7 708 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SYBUQ9NX95 663 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SELENONQ9NZV5 590 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CD300AQ9UGN4 299 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
CCDC33-209ENST00000560565 RNF11Q9Y3C5 154 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 SNX5Q9Y5X3 404 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ANAPC1Q9H1A4 1944 aa8.54□□□□□ -1.04
CCDC33-209ENST00000560565 ISPDA4D126 451 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 HTR3EA5X5Y0 456 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 SAGE2PA6NJ88 616 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 H3BMQ9 156 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NEMP1O14524 444 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NRP1O14786 923 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 LINC01565O15544 149 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 KDM1AO60341 852 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 DAB1O75553 588 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms